extractors.h File Reference

#include <BALL/common.h>
#include <BALL/DATATYPE/string.h>

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Namespaces
	BALL
	-*- Mode: C++; tab-width: 2; -*-

Typedefs
typedef std::list< Atom * >	BALL::AtomList
typedef std::list< Bond * >	BALL::BondList
typedef std::list < AtomContainer * >	BALL::AtomContainerList
typedef std::list< PDBAtom * >	BALL::PDBAtomList
typedef std::list< Residue * >	BALL::ResidueList
typedef std::list< Fragment * >	BALL::FragmentList
typedef std::list< Molecule * >	BALL::MoleculeList
typedef std::list< Protein * >	BALL::ProteinList
typedef std::list < SecondaryStructure * >	BALL::SecondaryStructureList
typedef std::list< Chain * >	BALL::ChainList
typedef std::list< Nucleotide * >	BALL::NucleotideList
typedef std::list< NucleicAcid * >	BALL::NucleicAcidList

Functions
BALL_EXPORT AtomList	BALL::atoms (const AtomContainer &fragment, const String &expression=String())
BALL_EXPORT AtomList	BALL::atoms (const AtomList &atoms, const String &expression)
BALL_EXPORT PDBAtomList	BALL::PDBAtoms (const AtomContainer &fragment, const String &expression=String())
BALL_EXPORT BondList	BALL::bonds (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT BondList	BALL::bonds (const Atom &atom)
BALL_EXPORT AtomContainerList	BALL::atomContainers (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT ResidueList	BALL::residues (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT FragmentList	BALL::fragments (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT MoleculeList	BALL::molecules (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT ProteinList	BALL::proteins (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT SecondaryStructureList	BALL::secondaryStructures (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT ChainList	BALL::chains (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT NucleicAcidList	BALL::nucleicAcids (const AtomContainer &fragment, bool selected_only=false)
BALL_EXPORT NucleotideList	BALL::nucleotides (const AtomContainer &fragment, bool selected_only=false)