#include <BALL/NMR/johnsonBoveyShiftProcessor.h>
Classes | |
struct | Ring |
Public Member Functions | |
Constructors and Destructors | |
JohnsonBoveyShiftProcessor () | |
virtual | ~JohnsonBoveyShiftProcessor () |
Processor specific functions. | |
virtual bool | start () |
virtual bool | finish () |
virtual Processor::Result | operator() (Composite &composite) |
Accessors | |
virtual void | init () |
Static Public Attributes | |
Enums and Constants | |
static const char * | PROPERTY__RING_CURRENT_SHIFT |
Protected Member Functions | |
double | carlsonEllipticalIntegral1_ (double, double, double) |
double | carlsonEllipticalIntegral2_ (double, double, double) |
double | legendreEllipticalIntegral1_ (double, double) |
double | legendreEllipticalIntegral2_ (double, double) |
Protected Attributes | |
std::list< Atom * > | proton_list_ |
std::list< Atom * > | atom_list_ |
std::list< Residue * > | aromat_list_ |
StringHashMap< Ring > | rings_ |
StringHashMap< Position > | residues_with_rings_ |
std::vector< Expression > | expressions_ |
Shift assignment processor implementing Johnson Bovey theory.
BALL::JohnsonBoveyShiftProcessor::JohnsonBoveyShiftProcessor | ( | ) |
Default constructor.
virtual BALL::JohnsonBoveyShiftProcessor::~JohnsonBoveyShiftProcessor | ( | ) | [virtual] |
Destructor
double BALL::JohnsonBoveyShiftProcessor::carlsonEllipticalIntegral1_ | ( | double | , | |
double | , | |||
double | ||||
) | [protected] |
double BALL::JohnsonBoveyShiftProcessor::carlsonEllipticalIntegral2_ | ( | double | , | |
double | , | |||
double | ||||
) | [protected] |
virtual bool BALL::JohnsonBoveyShiftProcessor::finish | ( | ) | [virtual] |
Finish method.
Reimplemented from BALL::ShiftModule.
virtual void BALL::JohnsonBoveyShiftProcessor::init | ( | ) | [virtual] |
Initialize all parameters required
Reimplemented from BALL::ShiftModule.
double BALL::JohnsonBoveyShiftProcessor::legendreEllipticalIntegral1_ | ( | double | , | |
double | ||||
) | [protected] |
double BALL::JohnsonBoveyShiftProcessor::legendreEllipticalIntegral2_ | ( | double | , | |
double | ||||
) | [protected] |
virtual Processor::Result BALL::JohnsonBoveyShiftProcessor::operator() | ( | Composite & | composite | ) | [virtual] |
Application method
Reimplemented from BALL::UnaryProcessor< Composite >.
virtual bool BALL::JohnsonBoveyShiftProcessor::start | ( | ) | [virtual] |
Start method.
Reimplemented from BALL::ShiftModule.
std::list<Residue*> BALL::JohnsonBoveyShiftProcessor::aromat_list_ [protected] |
std::list<Atom*> BALL::JohnsonBoveyShiftProcessor::atom_list_ [protected] |
std::vector<Expression> BALL::JohnsonBoveyShiftProcessor::expressions_ [protected] |
const char* BALL::JohnsonBoveyShiftProcessor::PROPERTY__RING_CURRENT_SHIFT [static] |
A symbolic name for the ring current contribution to the chemical shift
std::list<Atom*> BALL::JohnsonBoveyShiftProcessor::proton_list_ [protected] |
StringHashMap<Ring> BALL::JohnsonBoveyShiftProcessor::rings_ [protected] |