BALL  1.4.2
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Public Member Functions | Protected Attributes | List of all members
BALL::StretchComponent Class Reference

#include <BALL/MOLMEC/COMMON/stretchComponent.h>

Inheritance diagram for BALL::StretchComponent:
BALL::ForceFieldComponent BALL::AmberStretch BALL::CharmmStretch

Public Member Functions

 StretchComponent ()
 
 StretchComponent (ForceField &force_field)
 
virtual ~StretchComponent ()
 
Accessors
virtual double updateEnergy ()
  More...
 
virtual void updateForces ()
  More...
 
- Public Member Functions inherited from BALL::ForceFieldComponent
 ForceFieldComponent ()
 
 ForceFieldComponent (ForceField &force_field)
 
 ForceFieldComponent (const ForceFieldComponent &force_field_component)
 
virtual ~ForceFieldComponent ()
 
virtual bool setup () throw (Exception::TooManyErrors)
 
ForceFieldgetForceField () const
 
void setForceField (ForceField &force_field)
 
void setName (const String &name)
 
String getName () const
 
bool isEnabled () const
 
void setEnabled (bool state)
 
virtual double getEnergy () const
 
virtual void update () throw (Exception::TooManyErrors)
 

Protected Attributes

std::vector
< QuadraticBondStretch::Data
stretch_
 
QuadraticBondStretch stretch_parameters_
 
- Protected Attributes inherited from BALL::ForceFieldComponent
ForceFieldforce_field_
 
double energy_
 

Detailed Description

A ForceField component implementing the harmonic potential used by Amber and CHARMM

Definition at line 30 of file stretchComponent.h.

Constructor & Destructor Documentation

BALL::StretchComponent::StretchComponent ( )

Default Constructor

BALL::StretchComponent::StretchComponent ( ForceField force_field)

Detailed Constructor

virtual BALL::StretchComponent::~StretchComponent ( )
virtual

Destructor.

Member Function Documentation

virtual double BALL::StretchComponent::updateEnergy ( )
virtual

Returns the energy of the force field component. The current energy for this force field component is being calculated and returned in units of kJ/mol.

If the component isn't assigned to a ForceField object, zero is returned.

Reimplemented from BALL::ForceFieldComponent.

virtual void BALL::StretchComponent::updateForces ( )
virtual

Updates the atomic forces in the force field. The forces created by this ForceFieldComponent are calculated for each atom and updated in the corresponding array (forces) of the ForceField instance this component is assigned to.

Reimplemented from BALL::ForceFieldComponent.

Member Data Documentation

std::vector<QuadraticBondStretch::Data> BALL::StretchComponent::stretch_
protected

Definition at line 75 of file stretchComponent.h.

QuadraticBondStretch BALL::StretchComponent::stretch_parameters_
protected

Definition at line 79 of file stretchComponent.h.