#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h>
#include <OpenMS/CHEMISTRY/ModificationsDB.h>
#include <OpenMS/CONCEPT/VersionInfo.h>
#include <OpenMS/FORMAT/XQuestResultXMLFile.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/FORMAT/MzMLFile.h>
#include <OpenMS/FORMAT/ConsensusXMLFile.h>
#include <OpenMS/FORMAT/IdXMLFile.h>
#include <OpenMS/FORMAT/MzIdentMLFile.h>
#include <OpenMS/SYSTEM/File.h>