#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h>
#include <OpenMS/CONCEPT/Types.h>
#include <OpenMS/FORMAT/FeatureXMLFile.h>
#include <OpenMS/FORMAT/TraMLFile.h>
#include <OpenMS/KERNEL/FeatureMap.h>
#include <OpenMS/KERNEL/Feature.h>
#include <fstream>
#include <clocale>