#include <OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h>
#include <OpenMS/ANALYSIS/ID/SiriusMSConverter.h>
#include <OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h>
#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/CHEMISTRY/Element.h>
#include <OpenMS/CHEMISTRY/EmpiricalFormula.h>
#include <OpenMS/DATASTRUCTURES/ListUtils.h>
#include <OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h>
#include <OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h>
#include <OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h>
#include <OpenMS/FORMAT/MzMLFile.h>
#include <OpenMS/FORMAT/MzTabFile.h>
#include <OpenMS/SYSTEM/File.h>
#include <QDebug>
#include <QDir>
#include <QDirIterator>
#include <QtCore/QProcess>
#include <fstream>