#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/DATASTRUCTURES/StringListUtils.h>
#include <OpenMS/MATH/MISC/MathFunctions.h>
#include <OpenMS/KERNEL/ConsensusMap.h>
#include <OpenMS/FILTERING/ID/IDFilter.h>
#include <OpenMS/FORMAT/FileHandler.h>
#include <OpenMS/FORMAT/FileTypes.h>
#include <OpenMS/FORMAT/ConsensusXMLFile.h>
#include <OpenMS/FORMAT/FeatureXMLFile.h>
#include <OpenMS/METADATA/MetaInfoInterfaceUtils.h>
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/METADATA/ProteinHit.h>
#include <OpenMS/METADATA/PeptideEvidence.h>
#include <OpenMS/FORMAT/IdXMLFile.h>
#include <OpenMS/FORMAT/MzIdentMLFile.h>
#include <OpenMS/CHEMISTRY/ModificationsDB.h>
#include <OpenMS/FORMAT/MzTabFile.h>
#include <OpenMS/FORMAT/MzTab.h>
#include <vector>
#include <algorithm>