OpenMS
CrossLinksDB.h
Go to the documentation of this file.
1 // Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin
2 // SPDX-License-Identifier: BSD-3-Clause
3 //
4 // --------------------------------------------------------------------------
5 // $Maintainer: Timo Sachsenberg $
6 // $Authors: Andreas Bertsch $
7 // --------------------------------------------------------------------------
8 
9 #pragma once
10 
12 
13 namespace OpenMS
14 {
15  class OPENMS_DLLAPI CrossLinksDB :
16  public ModificationsDB
17  {
18  public:
19 
21  inline static CrossLinksDB* getInstance()
22  {
23  static CrossLinksDB* db_ = new CrossLinksDB;
24  return db_;
25  }
26 
34  void readFromOBOFile(const String& filename);
35 
37  void getAllSearchModifications(std::vector<String>& modifications) const;
38 
39  private:
40 
46 
48  CrossLinksDB(const CrossLinksDB& residue_db);
49 
51  ~CrossLinksDB() override;
53 
60 
61  };
62 }
63 
Definition: CrossLinksDB.h:17
~CrossLinksDB() override
Destructor.
CrossLinksDB & operator=(const CrossLinksDB &aa)
Assignment operator.
CrossLinksDB(const CrossLinksDB &residue_db)
Copy constructor.
static CrossLinksDB * getInstance()
Returns a pointer to the modifications DB (singleton)
Definition: CrossLinksDB.h:21
CrossLinksDB()
Default constructor.
void readFromOBOFile(const String &filename)
Adds modifications from a given file in OBO format.
void getAllSearchModifications(std::vector< String > &modifications) const
Collects all modifications that can be used for identification searches.
database which holds all residue modifications from UniMod
Definition: ModificationsDB.h:50
A more convenient string class.
Definition: String.h:34
Main OpenMS namespace.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:19