This is the complete list of members for ChromatogramExtractor, including all inherited members.
| CMD enum value | ProgressLogger | |
| current_logger_ | ProgressLogger | mutableprotected |
| endProgress(UInt64 bytes_processed=0) const | ProgressLogger | |
| extract_id_(TransitionExpT &transition_exp_used, const String &id, int &prec_charge) | ChromatogramExtractor | privatestatic |
| extractChromatograms(const OpenSwath::SpectrumAccessPtr input, std::vector< OpenSwath::ChromatogramPtr > &output, const std::vector< ExtractionCoordinates > &extraction_coordinates, double mz_extraction_window, bool ppm, const String &filter) | ChromatogramExtractor | inline |
| extractChromatograms(const OpenSwath::SpectrumAccessPtr input, std::vector< OpenSwath::ChromatogramPtr > &output, const std::vector< ExtractionCoordinates > &extraction_coordinates, double mz_extraction_window, bool ppm, double im_extraction_window, const String &filter) | ChromatogramExtractor | inline |
| ExtractionCoordinates typedef | ChromatogramExtractor | |
| getFilterNr_(const String &filter) | ChromatogramExtractor | private |
| getLogType() const | ProgressLogger | |
| GUI enum value | ProgressLogger | |
| last_invoke_ | ProgressLogger | mutableprotected |
| LogType enum name | ProgressLogger | |
| nextProgress() const | ProgressLogger | |
| NONE enum value | ProgressLogger | |
| operator=(const ProgressLogger &other) | ProgressLogger | |
| outsideExtractionWindow_(const ReactionMonitoringTransition &transition, double current_rt, const TransformationDescription &trafo, double rt_extraction_window) | ChromatogramExtractor | private |
| PeptideRTMap_ | ChromatogramExtractor | private |
| populatePeptideRTMap_(OpenMS::TargetedExperiment &transition_exp, double rt_extraction_window) | ChromatogramExtractor | private |
| prepare_coordinates(std::vector< OpenSwath::ChromatogramPtr > &output_chromatograms, std::vector< ExtractionCoordinates > &coordinates, const OpenMS::TargetedExperiment &transition_exp, const double rt_extraction_window, const bool ms1=false, const int ms1_isotopes=0) | ChromatogramExtractor | static |
| prepare_coordinates(std::vector< OpenSwath::ChromatogramPtr > &output_chromatograms, std::vector< ExtractionCoordinates > &coordinates, const OpenSwath::LightTargetedExperiment &transition_exp_used, const double rt_extraction_window, const bool ms1=false, const int ms1_isotopes=0) | ChromatogramExtractor | static |
| prepareSpectra_(SpectrumSettingsT &settings, std::vector< ChromatogramT > &chromatograms, OpenMS::TargetedExperiment &transition_exp) | ChromatogramExtractor | inlineprivate |
| ProgressLogger() | ProgressLogger | |
| ProgressLogger(const ProgressLogger &other) | ProgressLogger | |
| recursion_depth_ | ProgressLogger | protectedstatic |
| return_chromatogram(const std::vector< OpenSwath::ChromatogramPtr > &chromatograms, const std::vector< ChromatogramExtractor::ExtractionCoordinates > &coordinates, TransitionExpT &transition_exp_used, SpectrumSettings settings, std::vector< OpenMS::MSChromatogram > &output_chromatograms, bool ms1, double im_extraction_width=0.0) | ChromatogramExtractor | inlinestatic |
| setLogger(ProgressLoggerImpl *logger) | ProgressLogger | |
| setLogType(LogType type) const | ProgressLogger | |
| setProgress(SignedSize value) const | ProgressLogger | |
| startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
| type_ | ProgressLogger | mutableprotected |
| ~ProgressLogger() | ProgressLogger | virtual |
1.9.1 
