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IonMobilityScoring Member List

This is the complete list of members for IonMobilityScoring, including all inherited members.

alignToGrid_(const Mobilogram &profile, const std::vector< double > &im_grid, Mobilogram &aligned_profile, double eps, Size &max_peak_idx)IonMobilityScoringprivatestatic
CompoundType typedefIonMobilityScoringprivate
computeGrid_(const std::vector< Mobilogram > &mobilograms, double eps)IonMobilityScoringprivatestatic
computeIonMobilogram(const SpectrumSequence &spectra, const RangeMZ &mz_range, const RangeMobility &im_range, double &im, double &intensity, Mobilogram &res, double eps)IonMobilityScoringstatic
driftIdScoring(const SpectrumSequence &spectra, const std::vector< TransitionType > &transitions, MRMTransitionGroupType &transition_group_detection, OpenSwath_Scores &scores, const double drift_target, RangeMobility im_range, const double dia_extract_window_, const bool dia_extraction_ppm_, const double drift_extra, const bool apply_im_peak_picking)IonMobilityScoringstatic
driftScoring(const SpectrumSequence &spectra, const std::vector< TransitionType > &transitions, OpenSwath_Scores &scores, const double drift_target, RangeMobility im_range, const double dia_extraction_window_, const bool dia_extraction_ppm_, const double drift_extra, const bool apply_im_peak_picking)IonMobilityScoringstatic
driftScoringMS1(const SpectrumSequence &spectra, const std::vector< TransitionType > &transitions, OpenSwath_Scores &scores, const double drift_target, RangeMobility im_range, const double dia_extraction_window_, const bool dia_extraction_ppm_, const double drift_extra)IonMobilityScoringstatic
driftScoringMS1Contrast(const SpectrumSequence &spectra, const SpectrumSequence &ms1spectrum, const std::vector< TransitionType > &transitions, OpenSwath_Scores &scores, RangeMobility im_range, const double dia_extraction_window_, const bool dia_extraction_ppm_, const double drift_extra)IonMobilityScoringstatic
extractIntensities(const std::vector< Mobilogram > &mobilograms, std::vector< std::vector< double >> &int_values)IonMobilityScoringprivatestatic
extractIntensities(const Mobilogram &mobilogram)IonMobilityScoringprivatestatic
IonMobilityScoring()IonMobilityScoring
MRMTransitionGroupType typedefIonMobilityScoringprivate
TransitionType typedefIonMobilityScoringprivate
~IonMobilityScoring()IonMobilityScoring