check_defaults_ | DefaultParamHandler | protected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
DefaultParamHandler() | DefaultParamHandler | private |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
error_name_ | DefaultParamHandler | protected |
extractFloatValues_(const OpenMS::DataArrays::FloatDataArray &floatDataArray) | PeakPickerMobilogram | protectedstatic |
extractIntValues_(const OpenMS::DataArrays::FloatDataArray &floatDataArray) | PeakPickerMobilogram | protectedstatic |
filterPeakIntensities_(Mobilogram &mobilogram, size_t left_index, size_t right_index) | PeakPickerMobilogram | protected |
filterPeakIntensities_(std::vector< Mobilogram > &mobilograms, size_t left_index, size_t right_index) | PeakPickerMobilogram | protected |
filterTopPeak(Mobilogram &picked_mobilogram, std::vector< Mobilogram > &mobilograms, PeakPositions &peak_pos) | PeakPickerMobilogram | |
filterTopPeak(Mobilogram &picked_mobilogram, Mobilogram &mobilogram, PeakPositions &peak_pos) | PeakPickerMobilogram | |
filterTopPeak_(Mobilogram &picked_mobilogram, std::vector< Mobilogram > &mobilograms) | PeakPickerMobilogram | protected |
filterTopPeak_(Mobilogram &picked_mobilogram, Mobilogram &mobilograms) | PeakPickerMobilogram | protected |
findClosestPeak_(const Mobilogram &mobilogram, double target_im, Size current_peak=0) | PeakPickerMobilogram | protected |
findHighestPeak_(const std::vector< double > intensities, const std::vector< Size > left_widths, const std::vector< Size > right_widths, const size_t im_size) | PeakPickerMobilogram | protectedstatic |
FLOATINDICES enum name | PeakPickerMobilogram | |
gauss_ | PeakPickerMobilogram | protected |
gauss_width_ | PeakPickerMobilogram | protected |
getDefaults() const | DefaultParamHandler | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
IDX_ABUNDANCE enum value | PeakPickerMobilogram | |
IDX_FWHM enum value | PeakPickerMobilogram | |
IDX_LEFTBORDER enum value | PeakPickerMobilogram | |
IDX_OF_LEFTBORDER_IDX enum value | PeakPickerMobilogram | |
IDX_OF_RIGHTBORDER_IDX enum value | PeakPickerMobilogram | |
IDX_RIGHTBORDER enum value | PeakPickerMobilogram | |
integrated_intensities_ | PeakPickerMobilogram | |
integratePeaks_(const Mobilogram &mobilogram) | PeakPickerMobilogram | protected |
left_width_ | PeakPickerMobilogram | |
method_ | PeakPickerMobilogram | protected |
operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
peak_width_ | PeakPickerMobilogram | protected |
PeakPickerMobilogram() | PeakPickerMobilogram | |
pickMobilogram(const Mobilogram &mobilogram, Mobilogram &picked_mobilogram) | PeakPickerMobilogram | |
pickMobilogram(Mobilogram mobilogram, Mobilogram &picked_mobilogram, Mobilogram &smoothed_mobilogram) | PeakPickerMobilogram | |
pickMobilogram_(const Mobilogram &mobilogram, Mobilogram &picked_mobilogram) | PeakPickerMobilogram | protected |
pp_ | PeakPickerMobilogram | protected |
remove_overlapping_ | PeakPickerMobilogram | protected |
removeOverlappingPeaks_(const Mobilogram &mobilogram, Mobilogram &picked_mobilogram) | PeakPickerMobilogram | protected |
right_width_ | PeakPickerMobilogram | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
sgolay_ | PeakPickerMobilogram | protected |
sgolay_frame_length_ | PeakPickerMobilogram | protected |
sgolay_polynomial_order_ | PeakPickerMobilogram | protected |
signal_to_noise_ | PeakPickerMobilogram | protected |
SIZE_OF_FLOATINDICES enum value | PeakPickerMobilogram | |
sn_bin_count_ | PeakPickerMobilogram | protected |
sn_win_len_ | PeakPickerMobilogram | protected |
subsections_ | DefaultParamHandler | protected |
updateMembers_() override | PeakPickerMobilogram | protectedvirtual |
use_gauss_ | PeakPickerMobilogram | protected |
warn_empty_defaults_ | DefaultParamHandler | protected |
write_sn_log_messages_ | PeakPickerMobilogram | protected |
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="") | DefaultParamHandler | static |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~PeakPickerMobilogram() override | PeakPickerMobilogram | inline |