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PercolatorInfile Member List

This is the complete list of members for PercolatorInfile, including all inherited members.

countEnzymatic_(const String &peptide, const std::string &enz)PercolatorInfileprotectedstatic
getScanIdentifier(const PeptideIdentification &pid, size_t index)PercolatorInfilestatic
isEnz_(const char &n, const char &c, const std::string &enz)PercolatorInfileprotectedstatic
load(const String &pin_file, bool higher_score_better, const String &score_name, const StringList &extra_scores, StringList &filenames, String decoy_prefix="", double threshold=0.01, bool SageAnnotation=false)PercolatorInfilestatic
preparePin_(const std::vector< PeptideIdentification > &peptide_ids, const StringList &feature_set, const std::string &enz, int min_charge, int max_charge)PercolatorInfileprotectedstatic
store(const String &pin_file, const std::vector< PeptideIdentification > &peptide_ids, const StringList &feature_set, const std::string &enz, int min_charge, int max_charge)PercolatorInfilestatic