OpenMS  2.5.0
MSSim Member List

This is the complete list of members for MSSim, including all inherited members.

check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
consensus_map_MSSimprivate
contaminants_map_MSSimprivate
createFeatureMap_(const SimTypes::SampleProteins &peptides, SimTypes::FeatureMapSim &features, Size map_index)MSSimprotected
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
error_name_DefaultParamHandlerprotected
experiment_MSSimprivate
feature_maps_MSSimprivate
getChargeConsensus()MSSim
getContaminants() constMSSim
getDefaults() constDefaultParamHandler
getExperiment() constMSSim
getFeatureIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) constMSSim
getIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) constMSSim
getLabelingConsensus()MSSim
getLogType() constProgressLogger
getMS2Identifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) constMSSim
getName() constDefaultParamHandler
getParameters() constMSSim
getPeakMap() constMSSim
getSimulatedFeatures() constMSSim
getSubsections() constDefaultParamHandler
GUI enum valueProgressLogger
labeler_MSSimprivate
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
MSSim()MSSim
nextProgress() constProgressLogger
NONE enum valueProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
peak_map_MSSimprivate
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
simulate(SimTypes::MutableSimRandomNumberGeneratorPtr rnd_gen, SimTypes::SampleChannels &peptides)MSSim
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
syncParams_(Param &p, bool to_outer)MSSimprotected
type_ProgressLoggermutableprotected
updateMembers_() overrideMSSimprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~MSSim() overrideMSSim
~ProgressLogger()ProgressLogger
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