OpenMS
2.6.0
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#include <OpenMS/FORMAT/IdXMLFile.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/CHEMISTRY/ModificationsDB.h>
#include <OpenMS/CHEMISTRY/ProteaseDB.h>
#include <OpenMS/CHEMISTRY/ProteaseDigestion.h>
#include <OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h>
#include <OpenMS/CHEMISTRY/DigestionEnzyme.h>
#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <boost/regex.hpp>