TargetedExperiment.h File Reference

#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h>
#include <OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h>
#include <OpenMS/METADATA/CVTerm.h>
#include <OpenMS/METADATA/CVTermList.h>
#include <OpenMS/METADATA/Software.h>
#include <OpenMS/METADATA/SourceFile.h>
#include <OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h>
#include <vector>

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Classes
class	TargetedExperiment
	A description of a targeted experiment containing precursor and production ions. More...
struct	TargetedExperiment::SummaryStatistics

Namespaces
	OpenMS
	Main OpenMS namespace.
	OpenMS::TargetedExperimentHelper
	This class stores helper structures that are used in multiple classes of the TargetedExperiment (e.g. ReactionMonitoringTransition and IncludeExcludeTarget).

Functions
std::ostream &	operator<< (std::ostream &os, const TargetedExperiment::SummaryStatistics &s)
	prints out the summary statistics More...

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Class Documentation

OpenMS::TargetedExperiment::SummaryStatistics

struct OpenMS::TargetedExperiment::SummaryStatistics

Collaboration diagram for TargetedExperiment::SummaryStatistics:

Class Members
Size	compound_count
bool	contains_invalid_references
map< DecoyTransitionType, size_t >	decoy_counts	# target/decoy transitions
Size	peptide_count
Size	protein_count
Size	transition_count