OpenMS  2.7.0
Classes
Metadata

Classes that capture meta data about a MS or HPLC-MS experiment. More...

Classes

class  Acquisition
 Information about one raw data spectrum that was combined with several other raw data spectra. More...
 
class  AcquisitionInfo
 Description of the combination of raw data to a single spectrum. More...
 
class  ChromatogramSettings
 Representation of chromatogram settings, e.g. SRM/MRM chromatograms. More...
 
class  ContactPerson
 Contact person information. More...
 
class  CVTerm
 Representation of controlled vocabulary term. More...
 
class  CVTermList
 Representation of controlled vocabulary term list. More...
 
class  CVTermListInterface
 Interface to the controlled vocabulary term list. More...
 
class  DataProcessing
 Description of the applied preprocessing steps. More...
 
class  Digestion
 Meta information about digestion of a sample. More...
 
class  DocumentIdentifier
 Manage source document information. More...
 
class  DocumentIDTagger
 Tags OpenMS file containers with a DocumentID. More...
 
class  ExperimentalDesign
 Representation of an experimental design in OpenMS. Instances can be loaded with the ExperimentalDesignFile class. More...
 
class  ExperimentalSettings
 Description of the experimental settings. More...
 
class  Gradient
 Representation of a HPLC gradient. More...
 
class  HPLC
 Representation of a HPLC experiment. More...
 
class  IdentificationData
 Representation of spectrum identification results and associated data. More...
 
class  Identification
 Represents a object which can store the information of an analysisXML instance. More...
 
class  IdentificationHit
 Represents a object which can store the information of an analysisXML instance. More...
 
class  Instrument
 Description of a MS instrument. More...
 
class  InstrumentSettings
 Description of the settings a MS Instrument was run with. More...
 
class  IonDetector
 Description of a ion detector (part of a MS Instrument) More...
 
class  IonSource
 Description of an ion source (part of a MS Instrument) More...
 
class  MassAnalyzer
 Description of a mass analyzer (part of a MS Instrument) More...
 
class  MetaInfo
 A Type-Name-Value tuple class. More...
 
class  MetaInfoDescription
 Description of the meta data arrays of MSSpectrum. More...
 
class  MetaInfoInterface
 Interface for classes that can store arbitrary meta information (Type-Name-Value tuples). More...
 
class  MetaInfoRegistry
 Registry which assigns unique integer indices to strings. More...
 
class  Modification
 Meta information about chemical modification of a sample. More...
 
class  PeptideEvidence
 Representation of a peptide evidence. More...
 
class  PeptideHit
 Representation of a peptide hit. More...
 
class  PeptideIdentification
 Represents the peptide hits for a spectrum. More...
 
class  Precursor
 Precursor meta information. More...
 
class  Product
 Product meta information. More...
 
class  ProteinHit
 Representation of a protein hit. More...
 
class  ProteinIdentification
 Representation of a protein identification run. More...
 
class  Sample
 Meta information about the sample. More...
 
class  SampleTreatment
 Base class for sample treatments (Digestion, Modification, Tagging, ...) More...
 
struct  ScanWindow
 Scan window description. More...
 
class  Software
 Description of the software used for processing. More...
 
class  SourceFile
 Description of a file location, used to store the origin of (meta) data. More...
 
class  SpectrumIdentification
 Represents a object which can store the information of an analysisXML instance. More...
 
class  SpectrumSettings
 Representation of 1D spectrum settings. More...
 
class  Tagging
 Meta information about tagging of a sample e.g. ICAT labeling. More...
 
class  MQEvidence
 Builds a MaxQuant Evidence.txt. More...
 

Detailed Description

Classes that capture meta data about a MS or HPLC-MS experiment.

The top-level classes are OpenMS::ExperimentalSettings and OpenMS::SpectrumSettings .