CompNovoIonScoring Member List

This is the complete list of members for CompNovoIonScoring, including all inherited members.

addSingleChargedIons_(std::map< double, IonScore > &ion_scores, PeakSpectrum &CID_spec)	CompNovoIonScoringBase	protected
check_defaults_	DefaultParamHandler	protected
CHILD enum value	CompNovoIonScoringBase
classifyIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it) const	CompNovoIonScoringBase	protected
CompNovoIonScoring()	CompNovoIonScoring
CompNovoIonScoring(const CompNovoIonScoring &source)	CompNovoIonScoring
CompNovoIonScoringBase()	CompNovoIonScoringBase
CompNovoIonScoringBase(const CompNovoIonScoringBase &source)	CompNovoIonScoringBase
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
error_name_	DefaultParamHandler	protected
fragment_mass_tolerance_	CompNovoIonScoringBase	protected
getDefaults() const	DefaultParamHandler
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSubsections() const	DefaultParamHandler
initIsotopeDistributions_()	CompNovoIonScoringBase	protected
IonScore typedef	CompNovoIonScoring
isotope_distributions_	CompNovoIonScoringBase	protected
IsotopeType typedef	CompNovoIonScoring
LONE enum value	CompNovoIonScoringBase
operator=(const CompNovoIonScoring &source)	CompNovoIonScoring
OpenMS::CompNovoIonScoringBase::operator=(const CompNovoIonScoringBase &source)	CompNovoIonScoringBase
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
PARENT enum value	CompNovoIonScoringBase
scoreETDFeatures_(Size charge, double precursor_weight, std::map< double, IonScore > &CID_nodes, const PeakSpectrum &CID_orig_spec, const PeakSpectrum &ETD_orig_spec)	CompNovoIonScoring	protected
scoreIsotopes(const PeakSpectrum &CID_spec, PeakSpectrum::ConstIterator it, Size charge)	CompNovoIonScoringBase
scoreIsotopes_(const PeakSpectrum &spec, PeakSpectrum::ConstIterator it, std::map< double, IonScore > &CID_nodes, Size charge=1)	CompNovoIonScoringBase	protected
scoreSpectra(std::map< double, IonScore > &CID_ion_scores, PeakSpectrum &CID_spec, PeakSpectrum &ETD_spec, double precursor_weight, Size charge)	CompNovoIonScoring
scoreWitnessSet_(Size charge, double precursor_weight, std::map< double, IonScore > &CID_nodes, const PeakSpectrum &CID_orig_spec) override	CompNovoIonScoring	protectedvirtual
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
subsections_	DefaultParamHandler	protected
updateMembers_() override	CompNovoIonScoringBase	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")	DefaultParamHandler	static
~CompNovoIonScoring() override	CompNovoIonScoring
~CompNovoIonScoringBase() override	CompNovoIonScoringBase
~DefaultParamHandler()	DefaultParamHandler	virtual