OpenMS
FeatureGroupingAlgorithmKD Member List

This is the complete list of members for FeatureGroupingAlgorithmKD, including all inherited members.

addConsensusFeature_(const std::vector< Size > &indices, const KDTreeFeatureMaps &kd_data, ConsensusMap &out) constFeatureGroupingAlgorithmKDprivate
check_defaults_DefaultParamHandlerprotected
CMD enum valueProgressLogger
computeBestClusterForCenter_(Size i, std::vector< Size > &cf_indices, const std::vector< Int > &assigned, const KDTreeFeatureMaps &kd_data) constFeatureGroupingAlgorithmKDprivate
create()FeatureGroupingAlgorithmKDinlinestatic
current_logger_ProgressLoggermutableprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
endProgress() constProgressLogger
error_name_DefaultParamHandlerprotected
feature_distance_FeatureGroupingAlgorithmKDprivate
FeatureGroupingAlgorithm()FeatureGroupingAlgorithm
FeatureGroupingAlgorithm(const FeatureGroupingAlgorithm &)FeatureGroupingAlgorithmprivate
FeatureGroupingAlgorithmKD()FeatureGroupingAlgorithmKD
FeatureGroupingAlgorithmKD(const FeatureGroupingAlgorithmKD &)FeatureGroupingAlgorithmKDprivate
getDefaults() constDefaultParamHandler
getLogType() constProgressLogger
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getProductName()FeatureGroupingAlgorithmKDinlinestatic
getSubsections() constDefaultParamHandler
group(const std::vector< FeatureMap > &maps, ConsensusMap &out) overrideFeatureGroupingAlgorithmKDvirtual
group(const std::vector< ConsensusMap > &maps, ConsensusMap &out) overrideFeatureGroupingAlgorithmKDvirtual
group_(const std::vector< MapType > &input_maps, ConsensusMap &out)FeatureGroupingAlgorithmKDprivate
GUI enum valueProgressLogger
last_invoke_ProgressLoggermutableprotected
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
mz_ppm_FeatureGroupingAlgorithmKDprivate
mz_tol_FeatureGroupingAlgorithmKDprivate
nextProgress() constProgressLogger
NONE enum valueProgressLogger
operator=(const FeatureGroupingAlgorithmKD &)FeatureGroupingAlgorithmKDprivate
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandler
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)ProgressLogger
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
postprocess_(const std::vector< MapType > &maps, ConsensusMap &out)FeatureGroupingAlgorithminlineprotected
progress_FeatureGroupingAlgorithmKDprivate
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
registerChildren()FeatureGroupingAlgorithmstatic
rt_tol_secs_FeatureGroupingAlgorithmKDprivate
runClustering_(const KDTreeFeatureMaps &kd_data, ConsensusMap &out)FeatureGroupingAlgorithmKDprivate
setLogType(LogType type) constProgressLogger
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setProgress(SignedSize value) constProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
subsections_DefaultParamHandlerprotected
transferSubelements(const std::vector< ConsensusMap > &maps, ConsensusMap &out) constFeatureGroupingAlgorithm
type_ProgressLoggermutableprotected
updateClusterProxies_(std::set< ClusterProxyKD > &potential_clusters, std::vector< ClusterProxyKD > &cluster_for_idx, const std::set< Size > &update_these, const std::vector< Int > &assigned, const KDTreeFeatureMaps &kd_data)FeatureGroupingAlgorithmKDprivate
updateMembers_()DefaultParamHandlerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")DefaultParamHandlerstatic
~DefaultParamHandler()DefaultParamHandlervirtual
~FeatureGroupingAlgorithm() overrideFeatureGroupingAlgorithm
~FeatureGroupingAlgorithmKD() overrideFeatureGroupingAlgorithmKD
~ProgressLogger()ProgressLoggervirtual