OpenMS
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This is the complete list of members for TraMLHandler, including all inherited members.
ActionMode enum name | XMLHandler | |
actual_compound_ | TraMLHandler | protected |
actual_configuration_ | TraMLHandler | protected |
actual_contact_ | TraMLHandler | protected |
actual_instrument_ | TraMLHandler | protected |
actual_intermediate_products_ | TraMLHandler | protected |
actual_interpretation_ | TraMLHandler | protected |
actual_peptide_ | TraMLHandler | protected |
actual_prediction_ | TraMLHandler | protected |
actual_product_ | TraMLHandler | protected |
actual_protein_ | TraMLHandler | protected |
actual_publication_ | TraMLHandler | protected |
actual_rt_ | TraMLHandler | protected |
actual_software_ | TraMLHandler | protected |
actual_sourcefile_ | TraMLHandler | protected |
actual_target_ | TraMLHandler | protected |
actual_transition_ | TraMLHandler | protected |
actual_validation_ | TraMLHandler | protected |
asBool_(const String &in) const | XMLHandler | inlineprotected |
asDateTime_(String date_string) const | XMLHandler | inlineprotected |
asDouble_(const String &in) const | XMLHandler | inlineprotected |
asFloat_(const String &in) const | XMLHandler | inlineprotected |
asInt_(const String &in) const | XMLHandler | inlineprotected |
asInt_(const XMLCh *in) const | XMLHandler | inlineprotected |
asUInt_(const String &in) const | XMLHandler | inlineprotected |
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
cexp_ | TraMLHandler | protected |
characters(const XMLCh *const chars, const XMLSize_t length) override | TraMLHandler | |
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) const | XMLHandler | |
ConfigurationListType typedef | TraMLHandler | |
cv_ | TraMLHandler | protected |
cv_terms_ | XMLHandler | protected |
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | protected |
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override | TraMLHandler | |
equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inlineprotected |
error(const xercesc::SAXParseException &exception) override | XMLHandler | |
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
error_message_ | XMLHandler | mutableprotected |
errorString() | XMLHandler | |
exp_ | TraMLHandler | protected |
expectList_(const String &str) const | XMLHandler | inlineprivate |
fatalError(const xercesc::SAXParseException &exception) override | XMLHandler | |
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
file_ | XMLHandler | protected |
fromXSDString(const String &type, const String &value) | XMLHandler | inlinestatic |
getChildWithName_(const String &parent_accession, const String &name) const | TraMLHandler | protected |
getLoadDetail() const | XMLHandler | virtual |
handleCVParam_(const String &parent_parent_tag, const String &parent_tag, const CVTerm &cv_term) | TraMLHandler | protected |
handleUserParam_(const String &parent_parent_tag, const String &parent_tag, const String &name, const String &type, const String &value) | TraMLHandler | protected |
LD_ALLDATA enum value | XMLHandler | |
LD_COUNTS_WITHOPTIONS enum value | XMLHandler | |
LD_RAWCOUNTS enum value | XMLHandler | |
LOAD enum value | XMLHandler | |
load_detail_ | XMLHandler | protected |
LOADDETAIL enum name | XMLHandler | |
logger_ | TraMLHandler | protected |
open_tags_ | XMLHandler | protected |
operator=(const TraMLHandler &rhs)=delete | TraMLHandler | |
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
ProductListType typedef | TraMLHandler | |
reset() | XMLHandler | |
setLoadDetail(const LOADDETAIL d) | XMLHandler | virtual |
sm_ | XMLHandler | protected |
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override | TraMLHandler | |
STORE enum value | XMLHandler | |
tag_ | TraMLHandler | protected |
TraMLHandler()=delete | TraMLHandler | |
TraMLHandler(const TraMLHandler &rhs)=delete | TraMLHandler | |
TraMLHandler(const TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler | |
TraMLHandler(TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler | |
version_ | XMLHandler | protected |
warning(const xercesc::SAXParseException &exception) override | XMLHandler | |
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
writeConfiguration_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Configuration >::const_iterator &cit) const | TraMLHandler | protected |
writeCVList_(std::ostream &os, const std::map< String, std::vector< CVTerm >> &cv_terms, UInt indent) const | TraMLHandler | protected |
writeCVParams_(std::ostream &os, const CVTermList &cv_terms, UInt indent) const | TraMLHandler | protected |
writeCVParams_(std::ostream &os, const CVTermListInterface &cv_terms, UInt indent) const | TraMLHandler | protected |
writeProduct_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Product >::const_iterator &prod_it) const | TraMLHandler | protected |
writeRetentionTime_(std::ostream &os, const TargetedExperimentHelper::RetentionTime &rt) const | TraMLHandler | protected |
writeTarget_(std::ostream &os, const std::vector< IncludeExcludeTarget >::const_iterator &it) const | TraMLHandler | protected |
writeTo(std::ostream &os) override | TraMLHandler | virtual |
writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | TraMLHandler | protected |
OpenMS::Internal::XMLHandler::writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected |
writeUserParams_(std::ostream &os, const std::vector< MetaInfoInterface > &meta, UInt indent) const | TraMLHandler | protected |
writeXMLEscape(const String &to_escape) | XMLHandler | inlinestatic |
XMLHandler(const String &filename, const String &version) | XMLHandler | |
XMLHandler() | XMLHandler | private |
~TraMLHandler() override | TraMLHandler | |
~XMLHandler() override | XMLHandler |