OpenMS
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This is the complete list of members for UnimodXMLHandler, including all inherited members.
ActionMode enum name | XMLHandler | |
asBool_(const String &in) const | XMLHandler | inlineprotected |
asDateTime_(String date_string) const | XMLHandler | inlineprotected |
asDouble_(const String &in) const | XMLHandler | inlineprotected |
asFloat_(const String &in) const | XMLHandler | inlineprotected |
asInt_(const String &in) const | XMLHandler | inlineprotected |
asInt_(const XMLCh *in) const | XMLHandler | inlineprotected |
asUInt_(const String &in) const | XMLHandler | inlineprotected |
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
avge_mass_ | UnimodXMLHandler | private |
characters(const XMLCh *const chars, const XMLSize_t) override | UnimodXMLHandler | |
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) const | XMLHandler | |
cv_terms_ | XMLHandler | protected |
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | protected |
diff_formula_ | UnimodXMLHandler | private |
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override | UnimodXMLHandler | |
equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inlineprotected |
error(const xercesc::SAXParseException &exception) override | XMLHandler | |
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
error_message_ | XMLHandler | mutableprotected |
errorString() | XMLHandler | |
expectList_(const String &str) const | XMLHandler | inlineprivate |
fatalError(const xercesc::SAXParseException &exception) override | XMLHandler | |
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
file_ | XMLHandler | protected |
fromXSDString(const String &type, const String &value) | XMLHandler | inlinestatic |
getLoadDetail() const | XMLHandler | virtual |
LD_ALLDATA enum value | XMLHandler | |
LD_COUNTS_WITHOPTIONS enum value | XMLHandler | |
LD_RAWCOUNTS enum value | XMLHandler | |
LOAD enum value | XMLHandler | |
load_detail_ | XMLHandler | protected |
LOADDETAIL enum name | XMLHandler | |
modification_ | UnimodXMLHandler | private |
modifications_ | UnimodXMLHandler | private |
mono_mass_ | UnimodXMLHandler | private |
neutral_loss_avg_masses_ | UnimodXMLHandler | private |
neutral_loss_diff_formula_ | UnimodXMLHandler | private |
neutral_loss_diff_formulas_ | UnimodXMLHandler | private |
neutral_loss_mono_masses_ | UnimodXMLHandler | private |
open_tags_ | XMLHandler | protected |
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
reset() | XMLHandler | |
setLoadDetail(const LOADDETAIL d) | XMLHandler | virtual |
sites_ | UnimodXMLHandler | private |
sm_ | XMLHandler | protected |
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override | UnimodXMLHandler | |
STORE enum value | XMLHandler | |
tag_ | UnimodXMLHandler | private |
term_specs_ | UnimodXMLHandler | private |
UnimodXMLHandler(std::vector< ResidueModification * > &mods, const String &filename) | UnimodXMLHandler | |
version_ | XMLHandler | protected |
warning(const xercesc::SAXParseException &exception) override | XMLHandler | |
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
was_valid_peptide_modification_ | UnimodXMLHandler | private |
writeTo(std::ostream &) | XMLHandler | virtual |
writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected |
writeXMLEscape(const String &to_escape) | XMLHandler | inlinestatic |
XMLHandler(const String &filename, const String &version) | XMLHandler | |
XMLHandler() | XMLHandler | private |
~UnimodXMLHandler() override | UnimodXMLHandler | |
~XMLHandler() override | XMLHandler |