OpenMS
MascotInfile Member List

This is the complete list of members for MascotInfile, including all inherited members.

boundary_MascotInfileprotected
charges_MascotInfileprotected
cleavage_MascotInfileprotected
CMD enum valueProgressLogger
current_logger_ProgressLoggermutableprotected
db_MascotInfileprotected
endProgress() constProgressLogger
form_version_MascotInfileprotected
getBoundary()MascotInfile
getCharges()MascotInfile
getCleavage()MascotInfile
getDB()MascotInfile
getFormVersion()MascotInfile
getHits()MascotInfile
getInstrument()MascotInfile
getLogType() constProgressLogger
getMassType()MascotInfile
getMissedCleavages() constMascotInfile
getModifications()MascotInfile
getNextSpectrum_(std::istream &is, std::vector< std::pair< double, double > > &spectrum, UInt &charge, double &precursor_mz, double &precursor_int, double &rt, String &title)MascotInfileprotected
getPeakMassTolerance() constMascotInfile
getPrecursorMassTolerance() constMascotInfile
getSearchType()MascotInfile
getTaxonomy()MascotInfile
getVariableModifications()MascotInfile
GUI enum valueProgressLogger
hits_MascotInfileprotected
instrument_MascotInfileprotected
ion_mass_tolerance_MascotInfileprotected
last_invoke_ProgressLoggermutableprotected
load(const String &filename, MapType &exp)MascotInfileinline
LogType enum nameProgressLogger
logTypeToFactoryName_(LogType type)ProgressLoggerprotectedstatic
MascotInfile()MascotInfile
mass_type_MascotInfileprotected
missed_cleavages_MascotInfileprotected
mods_MascotInfileprotected
mz_MascotInfileprotected
nextProgress() constProgressLogger
NONE enum valueProgressLogger
operator=(const ProgressLogger &other)ProgressLogger
precursor_mass_tolerance_MascotInfileprotected
ProgressLogger()ProgressLogger
ProgressLogger(const ProgressLogger &other)ProgressLogger
recursion_depth_ProgressLoggerprotectedstatic
retention_time_MascotInfileprotected
search_title_MascotInfileprotected
search_type_MascotInfileprotected
setBoundary(const String &boundary)MascotInfile
setCharges(std::vector< Int > &charges)MascotInfile
setCleavage(const String &cleavage)MascotInfile
setDB(const String &db)MascotInfile
setFormVersion(const String &form_version)MascotInfile
setHits(const String &hits)MascotInfile
setInstrument(const String &instrument)MascotInfile
setLogType(LogType type) constProgressLogger
setMassType(const String &mass_type)MascotInfile
setMissedCleavages(UInt missed_cleavages)MascotInfile
setModifications(const std::vector< String > &mods)MascotInfile
setPeakMassTolerance(float ion_mass_tolerance)MascotInfile
setPrecursorMassTolerance(float precursor_mass_tolerance)MascotInfile
setProgress(SignedSize value) constProgressLogger
setSearchType(const String &search_type)MascotInfile
setTaxonomy(const String &taxonomy)MascotInfile
setVariableModifications(const std::vector< String > &mods)MascotInfile
startProgress(SignedSize begin, SignedSize end, const String &label) constProgressLogger
store(const String &filename, const PeakSpectrum &spec, double mz, double retention_time, String search_title)MascotInfile
store(const String &filename, const PeakMap &experiment, String search_title)MascotInfile
taxonomy_MascotInfileprotected
type_ProgressLoggermutableprotected
variable_mods_MascotInfileprotected
writeHeader_(FILE *fp)MascotInfileprotected
writeMSExperiment_(FILE *fp, const String &filename, const PeakMap &experiment)MascotInfileprotected
writeParameterHeader_(const String &name, FILE *fp, bool line_break=true)MascotInfileprotected
writeSpectrum_(FILE *fp, const String &filename, const PeakSpectrum &peaks)MascotInfileprotected
~MascotInfile() overrideMascotInfile
~ProgressLogger()ProgressLoggervirtual