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TargetedExperiment Member List
This is the complete list of members for
TargetedExperiment
, including all inherited members.
addCompound
(const Compound &rhs)
TargetedExperiment
addContact
(const Contact &contact)
TargetedExperiment
addCV
(const CV &cv)
TargetedExperiment
addExcludeTarget
(const IncludeExcludeTarget &target)
TargetedExperiment
addIncludeTarget
(const IncludeExcludeTarget &target)
TargetedExperiment
addInstrument
(const Instrument &instrument)
TargetedExperiment
addPeptide
(const Peptide &rhs)
TargetedExperiment
addProtein
(const Protein &protein)
TargetedExperiment
addPublication
(const Publication &publication)
TargetedExperiment
addSoftware
(const Software &software)
TargetedExperiment
addSourceFile
(const SourceFile &source_file)
TargetedExperiment
addTargetCVTerm
(const CVTerm &cv_term)
TargetedExperiment
addTransition
(const ReactionMonitoringTransition &transition)
TargetedExperiment
clear
(bool clear_meta_data)
TargetedExperiment
Compound
typedef
TargetedExperiment
compound_reference_map_
TargetedExperiment
mutable
protected
compound_reference_map_dirty_
TargetedExperiment
mutable
protected
CompoundReferenceMapType
typedef
TargetedExperiment
compounds_
TargetedExperiment
protected
Contact
typedef
TargetedExperiment
contacts_
TargetedExperiment
protected
containsInvalidReferences
() const
TargetedExperiment
createCompoundReferenceMap_
() const
TargetedExperiment
protected
createPeptideReferenceMap_
() const
TargetedExperiment
protected
createProteinReferenceMap_
() const
TargetedExperiment
protected
CV
typedef
TargetedExperiment
cvs_
TargetedExperiment
protected
exclude_targets_
TargetedExperiment
protected
getCompoundByRef
(const String &ref) const
TargetedExperiment
getCompounds
() const
TargetedExperiment
getContacts
() const
TargetedExperiment
getCVs
() const
TargetedExperiment
getExcludeTargets
() const
TargetedExperiment
getIncludeTargets
() const
TargetedExperiment
getInstruments
() const
TargetedExperiment
getPeptideByRef
(const String &ref) const
TargetedExperiment
getPeptides
() const
TargetedExperiment
getProteinByRef
(const String &ref) const
TargetedExperiment
getProteins
() const
TargetedExperiment
getPublications
() const
TargetedExperiment
getSoftware
() const
TargetedExperiment
getSourceFiles
() const
TargetedExperiment
getSummary
() const
TargetedExperiment
getTargetCVTerms
() const
TargetedExperiment
getTransitions
() const
TargetedExperiment
hasCompound
(const String &ref) const
TargetedExperiment
hasPeptide
(const String &ref) const
TargetedExperiment
hasProtein
(const String &ref) const
TargetedExperiment
include_targets_
TargetedExperiment
protected
Instrument
typedef
TargetedExperiment
instruments_
TargetedExperiment
protected
Interpretation
typedef
TargetedExperiment
IonType
typedef
TargetedExperiment
operator!=
(const TargetedExperiment &rhs) const
TargetedExperiment
operator+
(const TargetedExperiment &rhs) const
TargetedExperiment
operator+=
(const TargetedExperiment &rhs)
TargetedExperiment
operator+=
(TargetedExperiment &&rhs)
TargetedExperiment
operator=
(const TargetedExperiment &rhs)
TargetedExperiment
operator=
(TargetedExperiment &&rhs) noexcept
TargetedExperiment
operator==
(const TargetedExperiment &rhs) const
TargetedExperiment
Peptide
typedef
TargetedExperiment
peptide_reference_map_
TargetedExperiment
mutable
protected
peptide_reference_map_dirty_
TargetedExperiment
mutable
protected
PeptideReferenceMapType
typedef
TargetedExperiment
peptides_
TargetedExperiment
protected
Prediction
typedef
TargetedExperiment
Protein
typedef
TargetedExperiment
protein_reference_map_
TargetedExperiment
mutable
protected
protein_reference_map_dirty_
TargetedExperiment
mutable
protected
ProteinReferenceMapType
typedef
TargetedExperiment
proteins_
TargetedExperiment
protected
Publication
typedef
TargetedExperiment
publications_
TargetedExperiment
protected
RetentionTime
typedef
TargetedExperiment
setCompounds
(const std::vector< Compound > &rhs)
TargetedExperiment
setContacts
(const std::vector< Contact > &contacts)
TargetedExperiment
setCVs
(const std::vector< CV > &cvs)
TargetedExperiment
setExcludeTargets
(const std::vector< IncludeExcludeTarget > &targets)
TargetedExperiment
setIncludeTargets
(const std::vector< IncludeExcludeTarget > &targets)
TargetedExperiment
setInstruments
(const std::vector< Instrument > &instruments)
TargetedExperiment
setPeptides
(const std::vector< Peptide > &rhs)
TargetedExperiment
setPeptides
(std::vector< Peptide > &&rhs)
TargetedExperiment
setProteins
(const std::vector< Protein > &proteins)
TargetedExperiment
setProteins
(std::vector< Protein > &&proteins)
TargetedExperiment
setPublications
(const std::vector< Publication > &publications)
TargetedExperiment
setSoftware
(const std::vector< Software > &software)
TargetedExperiment
setSourceFiles
(const std::vector< SourceFile > &source_files)
TargetedExperiment
setTargetCVTerms
(const CVTermList &cv_terms)
TargetedExperiment
setTargetMetaValue
(const String &name, const DataValue &value)
TargetedExperiment
setTransitions
(const std::vector< ReactionMonitoringTransition > &transitions)
TargetedExperiment
setTransitions
(std::vector< ReactionMonitoringTransition > &&transitions)
TargetedExperiment
software_
TargetedExperiment
protected
sortTransitionsByName
()
TargetedExperiment
sortTransitionsByProductMZ
()
TargetedExperiment
source_files_
TargetedExperiment
protected
TargetedExperiment
()
TargetedExperiment
TargetedExperiment
(const TargetedExperiment &rhs)
TargetedExperiment
TargetedExperiment
(TargetedExperiment &&rhs) noexcept
TargetedExperiment
targets_
TargetedExperiment
protected
Transition
typedef
TargetedExperiment
transitions_
TargetedExperiment
protected
~TargetedExperiment
()
TargetedExperiment
virtual
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