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PercolatorFeatureSetHelper Member List

This is the complete list of members for PercolatorFeatureSetHelper, including all inherited members.

addCOMETFeatures(std::vector< PeptideIdentification > &peptide_ids, StringList &feature_set)PercolatorFeatureSetHelperstatic
addCONCATSEFeatures(std::vector< PeptideIdentification > &peptide_id_list, StringList &search_engines_used, StringList &feature_set)PercolatorFeatureSetHelperstatic
addMASCOTFeatures(std::vector< PeptideIdentification > &peptide_ids, StringList &feature_set)PercolatorFeatureSetHelperstatic
addMSFRAGGERFeatures(StringList &extra_features)PercolatorFeatureSetHelperstatic
addMSGFFeatures(std::vector< PeptideIdentification > &peptide_ids, StringList &feature_set)PercolatorFeatureSetHelperstatic
addMULTISEFeatures(std::vector< PeptideIdentification > &peptide_ids, StringList &search_engines_used, StringList &feature_set, bool complete_only=true, bool limits_imputation=false)PercolatorFeatureSetHelperstatic
addXTANDEMFeatures(std::vector< PeptideIdentification > &peptide_ids, StringList &feature_set)PercolatorFeatureSetHelperstatic
assignDeltaScore_(std::vector< PeptideHit > &hits, const String &score_ref, const String &output_ref)PercolatorFeatureSetHelperprotectedstatic
checkExtraFeatures(const std::vector< PeptideHit > &psms, StringList &extra_features)PercolatorFeatureSetHelperstatic
concatMULTISEPeptideIds(std::vector< PeptideIdentification > &all_peptide_ids, std::vector< PeptideIdentification > &new_peptide_ids, const String &search_engine)PercolatorFeatureSetHelperstatic
getScanMergeKey_(std::vector< PeptideIdentification >::iterator it, std::vector< PeptideIdentification >::iterator start)PercolatorFeatureSetHelperprotectedstatic
mergeMULTISEPeptideIds(std::vector< PeptideIdentification > &all_peptide_ids, std::vector< PeptideIdentification > &new_peptide_ids, const String &search_engine)PercolatorFeatureSetHelperstatic
mergeMULTISEProteinIds(std::vector< ProteinIdentification > &all_protein_ids, std::vector< ProteinIdentification > &new_protein_ids)PercolatorFeatureSetHelperstatic
rescaleFragmentFeature_(double featureValue, int NumMatchedMainIons)PercolatorFeatureSetHelperprotectedstatic