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VIEW::AddVanDerWaalsModel Class Reference
[Model Processors]

AddVanDerWaalsModel class. More...

#include <vanDerWaalsModel.h>

Inheritance diagram for VIEW::AddVanDerWaalsModel:

VIEW::AtomBondModelBaseProcessor VIEW::ModelProcessor UnaryProcessor< Composite > PropertyManager UnaryFunctor< Composite, Processor::Result > List of all members.

Public Member Functions

Constructors and Destructor
 AddVanDerWaalsModel () throw ()
 Default Constructor.
 AddVanDerWaalsModel (const AddVanDerWaalsModel &add_van_der_waals_model) throw ()
 Copy constructor.
virtual ~AddVanDerWaalsModel () throw ()
 Destructor.
Processor specific methods
virtual Processor::Result operator() (Composite &composite)
 Operator method.
debuggers and diagnostics
virtual void dump (std::ostream &s=std::cout, Size depth=0) const throw ()
 Internal value dump.
void setVDWRadiusFactor (float value) throw ()
 Default = 1.
float getVDWRadiusFactor () const throw ()

Protected Attributes

float radius_factor_

Detailed Description

AddVanDerWaalsModel class.

AddVanDerWaalsModel is a model processor that is responsible for creating a Van der Waals model. For information about the processor concept see Processor.


Constructor & Destructor Documentation

VIEW::AddVanDerWaalsModel::AddVanDerWaalsModel  )  throw ()
 

Default Constructor.

VIEW::AddVanDerWaalsModel::AddVanDerWaalsModel const AddVanDerWaalsModel add_van_der_waals_model  )  throw ()
 

Copy constructor.

virtual VIEW::AddVanDerWaalsModel::~AddVanDerWaalsModel  )  throw () [virtual]
 

Destructor.


Member Function Documentation

virtual void VIEW::AddVanDerWaalsModel::dump std::ostream &  s = std::cout,
Size  depth = 0
const throw () [virtual]
 

Internal value dump.

Dump the current state to the output ostream with a given dumping depth. Calls AtomBondModelBaseProcessor::dump.

Parameters:
s output stream where to output the state
depth the dumping depth

Reimplemented from VIEW::AtomBondModelBaseProcessor.

virtual Processor::Result VIEW::AddVanDerWaalsModel::operator() Composite composite  )  [virtual]
 

Operator method.

This method iterates over each Composite object reachable in the Composite tree. If the Composite is of kind Atom, than a Sphere with radius getVanDerWaalsRadius() is created for that atom, and the atom is appended with the method insertAtom_(). The color for that Sphere object is calculated with the ColorCalculator object retrieved with the method getColorCalculator(). All atoms inserted with the method insertAtom_() will later be used for creating the model of the reachable Bond objects. Those models will be created with the method buildBondModels_().

Parameters:
composite the Composite object that will be processed
Returns:
Processor::Result the result
Exceptions:
OutOfMemory thrown if the memory allocation for a Sphere failed

Reimplemented from VIEW::AtomBondModelBaseProcessor.