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FeatureSummary.h
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1// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
2// SPDX-License-Identifier: BSD-3-Clause
3//
4// --------------------------------------------------------------------------
5// $Maintainer: Axel Walter $
6// $Authors: Axel Walter $
7// --------------------------------------------------------------------------
8
9#pragma once
10
12#include <OpenMS/QC/QCBase.h>
13
22namespace OpenMS
23{
24 class OPENMS_DLLAPI FeatureSummary : public QCBase
25 {
26 public:
28 FeatureSummary() = default;
29
31 virtual ~FeatureSummary() = default;
32
33 // stores feature summary values calculated by compute function
34 struct OPENMS_DLLAPI Result {
35 UInt feature_count = 0;
36 float rt_shift_mean = 0;
37
38 bool operator==(const Result& rhs) const;
39 };
40
49 Result compute(const FeatureMap& feature_map);
50
51 const String& getName() const override;
52
53 QCBase::Status requirements() const override;
54
55 private:
56 const String name_ = "Summary of features from featureXML file";
57 };
58} // namespace OpenMS
A container for features.
Definition FeatureMap.h:82
Definition FeatureSummary.h:25
virtual ~FeatureSummary()=default
Destructor.
const String & getName() const override
Returns the name of the metric.
FeatureSummary()=default
Constructor.
QCBase::Status requirements() const override
Returns the input data requirements of the compute(...) function.
Result compute(const FeatureMap &feature_map)
computes a summary of a featureXML file
Stores and handles combinations of enum values, e.g. a set of flags as bits flipped in an UInt64.
Definition FlagSet.h:28
This class serves as an abstract base class for all QC classes.
Definition QCBase.h:29
A more convenient string class.
Definition String.h:34
unsigned int UInt
Unsigned integer type.
Definition Types.h:64
Main OpenMS namespace.
Definition openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:19
Definition FeatureSummary.h:34
bool operator==(const Result &rhs) const