MRMFragmentSelection.h

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// Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/KERNEL/MSSpectrum.h>
 
#include <vector>
 
namespace OpenMS
{
  class OPENMS_DLLAPI MRMFragmentSelection :
    public DefaultParamHandler
  {
 
public:
 
    MRMFragmentSelection();
 
    MRMFragmentSelection(const MRMFragmentSelection & rhs);
 
    ~MRMFragmentSelection() override;
 
    MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs);
 
    void selectFragments(std::vector<Peak1D> & selected_peaks, const MSSpectrum & spec);
 
protected:
 
    bool peakselectionIsAllowed_(const String& name, const int charge);
  };
}