OpenSwathInferenceData.h File Reference

#include <OpenMS/DATASTRUCTURES/StringUtils.h>
#include <OpenMS/CONCEPT/Types.h>
#include <OpenMS/config.h>
#include <optional>
#include <vector>

Include dependency graph for OpenSwathInferenceData.h:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Classes
struct	IPFPrecursorRow
	Peak-group and precursor evidence for peptidoform inference. More...
struct	IPFPrecursorProbabilityRow
	Precursor-layer posterior error probability used by IPF. More...
struct	IPFTransitionRow
	Transition-layer evidence for peptidoform inference. More...
struct	IPFAlignmentRow
	Alignment-group membership for cross-run IPF signal propagation. More...
struct	IPFResultRow
	Final peptidoform inference result row. More...
struct	LevelContextInputRow
	Compact level-context input row independent of file format. More...
struct	LevelContextResultRow
	Final level-context result row. More...

Namespaces
namespace	OpenMS
	Main OpenMS namespace.

Enumerations
enum class	InferenceLevel { Peptidoform , Peptide , Protein , Gene }
	Inference level for OpenSWATH-derived confidence inference. More...
enum class	InferenceContext { Global , ExperimentWide , RunSpecific }
	Context for peptide-, protein-, and gene-level inference. More...

Functions
std::string	toString (const InferenceLevel level)
	String conversion helper for inference levels.
std::string	toString (const InferenceContext context)
	String conversion helper for inference contexts.