OpenSwathScores.h File Reference

#include <OpenMS/OpenMSConfig.h>
#include <OpenMS/CONCEPT/Types.h>
#include <OpenMS/DATASTRUCTURES/String.h>
#include <vector>

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Classes
struct	OpenSwath_Scores_Usage
	A structure to store which scores should be used by the OpenSWATH Algorithm. More...
struct	OpenSwath_Scores
	A structure to hold the different scores computed by OpenSWATH. More...
struct	OpenSwath_Ind_Scores
	A structure to hold the individual scores computed for unique ion signatures (UIS) scores for the Inference of Peptidoforms (IPF) workflow. More...

Namespaces
namespace	OpenMS
	Main OpenMS namespace.

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Class Documentation

OpenMS::OpenSwath_Scores_Usage

struct OpenMS::OpenSwath_Scores_Usage

A structure to store which scores should be used by the OpenSWATH Algorithm.

This can be used to turn on/off individual scores.

Collaboration diagram for OpenSwath_Scores_Usage:

Class Members
bool	use_coelution_score_ = true
bool	use_dia_scores_ = true
bool	use_elution_model_score_ = true
bool	use_im_scores = true
bool	use_intensity_score_ = true
bool	use_ionseries_scores = true
bool	use_library_score_ = true
bool	use_mi_score_ = true
bool	use_ms1_correlation = true
bool	use_ms1_fullscan = true
bool	use_ms1_mi = true
bool	use_ms2_isotope_scores = true
bool	use_nr_peaks_score_ = true
bool	use_peak_shape_metrics = false
bool	use_rt_score_ = true
bool	use_shape_score_ = true
bool	use_sn_score_ = true
bool	use_total_mi_score_ = true
bool	use_total_xic_score_ = true
bool	use_uis_scores = true