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OpenMS
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#include <OpenMS/APPLICATIONS/TOPPBase.h>#include <OpenMS/FORMAT/FileHandler.h>#include <OpenMS/CONCEPT/LogStream.h>#include <OpenMS/KERNEL/MSExperiment.h>#include <OpenMS/METADATA/PeptideIdentificationList.h>#include <OpenMS/METADATA/ProteinIdentification.h>#include <OpenMS/FORMAT/FileTypes.h>#include <OpenMS/FORMAT/SVOutStream.h>#include <OpenMS/FEATUREFINDER/SeedListGenerator.h>#include <map>#include <OpenMS/KERNEL/ConsensusMap.h>#include <OpenMS/SYSTEM/File.h>