SwathMap.h

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// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h>
#include <cmath>
 
namespace OpenSwath
{
  struct SwathMap
  {
    OpenSwath::SpectrumAccessPtr sptr;
    double lower;
    double upper;
    double center;
    double imLower;
    double imUpper;
    bool ms1;
 
    SwathMap() :
      lower(0.0),
      upper(0.0),
      center(0.0),
      imLower(-1),
      imUpper(-1),
      ms1(false)
    {}
 
    SwathMap(double mz_start, double mz_end, double mz_center, bool is_ms1)
      : lower(mz_start),
        upper(mz_end),
        center(mz_center),
        imLower(-1),
        imUpper(-1),
        ms1(is_ms1)
 
    {}
 
 
    SwathMap(double mz_start, double mz_end, double mz_center, double imLower, double imUpper, bool is_ms1)
      : lower(mz_start),
        upper(mz_end),
        center(mz_center),
        imLower(imLower),
        imUpper(imUpper),
        ms1(is_ms1)
    {}
 
  bool isEqual(const SwathMap& other, double tolerance = 1e-6) const
  {
        return (std::fabs(lower - other.lower) < tolerance) &&
              (std::fabs(upper - other.upper) < tolerance) &&
              (std::fabs(center - other.center) < tolerance) &&
              (std::fabs(imLower - other.imLower) < tolerance) &&
              (std::fabs(imUpper - other.imUpper) < tolerance) &&
              (ms1 == other.ms1);
  }
 
  };
 
} //end Namespace OpenSwath