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TMTThirtyTwoPlexQuantitationMethod.h File Reference
#include <OpenMS/config.h>
#include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h>
Include dependency graph for TMTThirtyTwoPlexQuantitationMethod.h:
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Go to the source code of this file.

Classes

class  TMTThirtyTwoPlexQuantitationMethod
 TMT 32plex quantitation to be used for the IsobaricQuantitation. Parameters of this class are:

NameTypeDefaultRestrictionsDescription
channel_126_description string  Description for the content of the 126 channel.
channel_127N_description string  Description for the content of the 127N channel.
channel_127C_description string  Description for the content of the 127C channel.
channel_127D_description string  Description for the content of the 127D channel.
channel_128N_description string  Description for the content of the 128N channel.
channel_128C_description string  Description for the content of the 128C channel.
channel_128ND_description string  Description for the content of the 128ND channel.
channel_128CD_description string  Description for the content of the 128CD channel.
channel_129N_description string  Description for the content of the 129N channel.
channel_129C_description string  Description for the content of the 129C channel.
channel_129ND_description string  Description for the content of the 129ND channel.
channel_129CD_description string  Description for the content of the 129CD channel.
channel_130N_description string  Description for the content of the 130N channel.
channel_130C_description string  Description for the content of the 130C channel.
channel_130ND_description string  Description for the content of the 130ND channel.
channel_130CD_description string  Description for the content of the 130CD channel.
channel_131N_description string  Description for the content of the 131N channel.
channel_131C_description string  Description for the content of the 131C channel.
channel_131ND_description string  Description for the content of the 131ND channel.
channel_131CD_description string  Description for the content of the 131CD channel.
channel_132N_description string  Description for the content of the 132N channel.
channel_132C_description string  Description for the content of the 132C channel.
channel_132ND_description string  Description for the content of the 132ND channel.
channel_132CD_description string  Description for the content of the 132CD channel.
channel_133N_description string  Description for the content of the 133N channel.
channel_133C_description string  Description for the content of the 133C channel.
channel_133ND_description string  Description for the content of the 133ND channel.
channel_133CD_description string  Description for the content of the 133CD channel.
channel_134N_description string  Description for the content of the 134N channel.
channel_134ND_description string  Description for the content of the 134ND channel.
channel_134CD_description string  Description for the content of the 134CD channel.
channel_135ND_description string  Description for the content of the 135ND channel.
reference_channel string126 126, 127N, 127C, 127D, 128N, 128C, 128ND, 128CD, 129N, 129C, 129ND, 129CD, 130N, 130C, 130ND, 130CD, 131N, 131C, 131ND, 131CD, 132N, 132C, 132ND, 132CD, 133N, 133C, 133ND, 133CD, 134N, 134ND, 134CD, 135NDThe reference channel (126, 127N, 127C, 127D, 128N, 128C, 128ND, 128CD, 129N, 129C, 129ND, 129CD, 130N, 130C, 130ND, 130CD, 131N, 131C, 131ND, 131CD, 132N, 132C, 132ND, 132CD, 133N, 133C, 133ND, 133CD, 134N, 134ND, 134CD, 135ND).
correction_matrix string list[NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA, NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA/NA]  Ignored for TMT 32-plex (identity matrix is always used). Isotope correction is not yet supported for this method.

Note:
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  • Advanced parameter names are italic.
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Namespaces

namespace  OpenMS
 Main OpenMS namespace.