MSSpectrum Member List

This is the complete list of members for MSSpectrum, including all inherited members.

acquisition_info_	SpectrumSettings	protected
addMetaValues(const MetaInfoInterface &from)	MetaInfoInterface
assign(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
assignUnsafe(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
calculateTIC() const	MSSpectrum
CENTROID enum value	SpectrumSettings
clampTo(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
clampToUnsafe(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
clear(bool clear_meta_data)	MSSpectrum
RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >::clear(const DIM_UNIT range)	RangeManager< RangeBases... >	inline
clearMetaInfo()	MetaInfoInterface
clearRanges()	RangeManager< RangeBases... >	inline
comment_	SpectrumSettings	protected
ConstIterator typedef	MSSpectrum
ConstReverseIterator typedef	MSSpectrum
ContainerType typedef	MSSpectrum
containsAll(const RangeManager< RangeBasesOther... > &rhs) const	RangeManager< RangeBases... >	inline
containsIMData() const	MSSpectrum
CoordinateType typedef	MSSpectrum
createIfNotExists_()	MetaInfoInterface	inlineprotected
data_processing_	SpectrumSettings	protected
drift_time_	MSSpectrum	protected
drift_time_unit_	MSSpectrum	protected
extend(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
extendUnsafe(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
findHighestInWindow(CoordinateType mz, CoordinateType tolerance_left, CoordinateType tolerance_right) const	MSSpectrum
findNearest(CoordinateType mz) const	MSSpectrum
findNearest(CoordinateType mz, CoordinateType tolerance) const	MSSpectrum
findNearest(CoordinateType mz, CoordinateType tolerance_left, CoordinateType tolerance_right) const	MSSpectrum
float_data_arrays_	MSSpectrum	protected
FloatDataArray typedef	MSSpectrum
FloatDataArrays typedef	MSSpectrum
for_each_base_(Visitor &&visitor)	RangeManager< RangeBases... >	inlineprotected
for_each_base_(Visitor &&visitor) const	RangeManager< RangeBases... >	inlineprotected
getAcquisitionInfo() const	SpectrumSettings
getAcquisitionInfo()	SpectrumSettings
getBasePeak() const	MSSpectrum
getBasePeak()	MSSpectrum
getComment() const	SpectrumSettings
getDataProcessing()	SpectrumSettings
getDataProcessing() const	SpectrumSettings
getDriftTime() const	MSSpectrum
getDriftTimeUnit() const	MSSpectrum
getDriftTimeUnitAsString() const	MSSpectrum
getFloatDataArrays() const	MSSpectrum
getFloatDataArrays()	MSSpectrum	inline
getIMData() const	MSSpectrum
getInstrumentSettings() const	SpectrumSettings
getInstrumentSettings()	SpectrumSettings
getIntegerDataArrays() const	MSSpectrum
getIntegerDataArrays()	MSSpectrum
getKeys(std::vector< String > &keys) const	MetaInfoInterface
getKeys(std::vector< UInt > &keys) const	MetaInfoInterface
getMetaValue(const String &name) const	MetaInfoInterface
getMetaValue(const String &name, const DataValue &default_value) const	MetaInfoInterface
getMetaValue(UInt index) const	MetaInfoInterface
getMetaValue(UInt index, const DataValue &default_value) const	MetaInfoInterface
getMSLevel() const	MSSpectrum
getName() const	MSSpectrum
getNativeID() const	SpectrumSettings
getPeptideIdentifications() const	SpectrumSettings
getPeptideIdentifications()	SpectrumSettings
getPrecursors() const	SpectrumSettings
getPrecursors()	SpectrumSettings
getProducts() const	SpectrumSettings
getProducts()	SpectrumSettings
getRange() const	RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >	inline
getRange()	RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >	inline
getRangeForDim(MSDim dim) const	RangeManager< RangeBases... >	inline
getRangeForDim(MSDim dim)	RangeManager< RangeBases... >	inline
getRT() const	MSSpectrum
getSourceFile() const	SpectrumSettings
getSourceFile()	SpectrumSettings
getStringDataArrays() const	MSSpectrum
getStringDataArrays()	MSSpectrum
getType(const bool query_data) const	MSSpectrum
getType() const	MSSpectrum
OpenMS::SpectrumSettings::getType() const	SpectrumSettings
hasRange() const	RangeManager< RangeBases... >	inline
identification_	SpectrumSettings	protected
instrument_settings_	SpectrumSettings	protected
integer_data_arrays_	MSSpectrum	protected
IntegerDataArray typedef	MSSpectrum
IntegerDataArrays typedef	MSSpectrum
isMetaEmpty() const	MetaInfoInterface
isSorted() const	MSSpectrum
isSorted(const Predicate &lambda) const	MSSpectrum	inline
isSortedByIM() const	MSSpectrum
Iterator typedef	MSSpectrum
maybeGetIMData() const	MSSpectrum
meta_	MetaInfoInterface	protected
MetaInfoInterface()	MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)	MetaInfoInterface
MetaInfoInterface(MetaInfoInterface &&) noexcept	MetaInfoInterface
metaRegistry()	MetaInfoInterface	static
metaValueExists(const String &name) const	MetaInfoInterface
metaValueExists(UInt index) const	MetaInfoInterface
minSpanIfSingular(const double min_span)	RangeManager< RangeBases... >	inline
ms_level_	MSSpectrum	protected
MSSpectrum()	MSSpectrum
MSSpectrum(const std::initializer_list< Peak1D > &init)	MSSpectrum
MSSpectrum(const MSSpectrum &source)	MSSpectrum
MSSpectrum(MSSpectrum &&)=default	MSSpectrum
MZBegin(CoordinateType mz)	MSSpectrum
MZBegin(Iterator begin, CoordinateType mz, Iterator end)	MSSpectrum
MZBegin(CoordinateType mz) const	MSSpectrum
MZBegin(ConstIterator begin, CoordinateType mz, ConstIterator end) const	MSSpectrum
MZEnd(CoordinateType mz)	MSSpectrum
MZEnd(Iterator begin, CoordinateType mz, Iterator end)	MSSpectrum
MZEnd(CoordinateType mz) const	MSSpectrum
MZEnd(ConstIterator begin, CoordinateType mz, ConstIterator end) const	MSSpectrum
name_	MSSpectrum	protected
NamesOfSpectrumType	SpectrumSettings	static
native_id_	SpectrumSettings	protected
operator!=(const MSSpectrum &rhs) const	MSSpectrum	inline
RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >::operator!=(const RangeManager &rhs) const	RangeManager< RangeBases... >	inline
OpenMS::SpectrumSettings::operator!=(const SpectrumSettings &rhs) const	SpectrumSettings
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const	MetaInfoInterface
operator=(const MSSpectrum &source)	MSSpectrum
operator=(MSSpectrum &&) &=default	MSSpectrum
operator=(const SpectrumSettings &source)	MSSpectrum
OpenMS::SpectrumSettings::operator=(SpectrumSettings &&) &=default	SpectrumSettings
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)	MetaInfoInterface
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexcept	MetaInfoInterface
operator==(const MSSpectrum &rhs) const	MSSpectrum
RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >::operator==(const RangeManager &rhs) const	RangeManager< RangeBases... >	inline
OpenMS::SpectrumSettings::operator==(const SpectrumSettings &rhs) const	SpectrumSettings
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const	MetaInfoInterface
PeakType typedef	MSSpectrum
PosBegin(CoordinateType mz)	MSSpectrum
PosBegin(Iterator begin, CoordinateType mz, Iterator end)	MSSpectrum
PosBegin(CoordinateType mz) const	MSSpectrum
PosBegin(ConstIterator begin, CoordinateType mz, ConstIterator end) const	MSSpectrum
PosEnd(CoordinateType mz)	MSSpectrum
PosEnd(Iterator begin, CoordinateType mz, Iterator end)	MSSpectrum
PosEnd(CoordinateType mz) const	MSSpectrum
PosEnd(ConstIterator begin, CoordinateType mz, ConstIterator end) const	MSSpectrum
precursors_	SpectrumSettings	protected
printRange(std::ostream &out) const	RangeManager< RangeBases... >	inline
products_	SpectrumSettings	protected
PROFILE enum value	SpectrumSettings
pushInto(const RangeManager< RangeBasesOther... > &sandbox)	RangeManager< RangeBases... >	inline
pushIntoUnsafe(const RangeManager< RangeBasesOther... > &rhs)	RangeManager< RangeBases... >	inline
RangeManagerContainerType typedef	MSSpectrum
RangeManagerType typedef	MSSpectrum
removeMetaValue(const String &name)	MetaInfoInterface
removeMetaValue(UInt index)	MetaInfoInterface
retention_time_	MSSpectrum	protected
ReverseIterator typedef	MSSpectrum
scaleBy(const double factor)	RangeManager< RangeBases... >	inline
select(const std::vector< Size > &indices)	MSSpectrum
setAcquisitionInfo(const AcquisitionInfo &acquisition_info)	SpectrumSettings
setComment(const String &comment)	SpectrumSettings
setDataProcessing(const std::vector< DataProcessingPtr > &data_processing)	SpectrumSettings
setDriftTime(double dt)	MSSpectrum
setDriftTimeUnit(DriftTimeUnit dt)	MSSpectrum
setFloatDataArrays(const FloatDataArrays &fda)	MSSpectrum
setInstrumentSettings(const InstrumentSettings &instrument_settings)	SpectrumSettings
setIntegerDataArrays(const IntegerDataArrays &ida)	MSSpectrum
setMetaValue(const String &name, const DataValue &value)	MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)	MetaInfoInterface
setMSLevel(UInt ms_level)	MSSpectrum
setName(const String &name)	MSSpectrum
setNativeID(const String &native_id)	SpectrumSettings
setPeptideIdentifications(const std::vector< PeptideIdentification > &identifications)	SpectrumSettings
setPrecursors(const std::vector< Precursor > &precursors)	SpectrumSettings
setProducts(const std::vector< Product > &products)	SpectrumSettings
setRT(double rt)	MSSpectrum
setSourceFile(const SourceFile &source_file)	SpectrumSettings
setStringDataArrays(const StringDataArrays &sda)	MSSpectrum
setType(SpectrumType type)	SpectrumSettings
SIZE_OF_SPECTRUMTYPE enum value	SpectrumSettings
sort(const Predicate &lambda)	MSSpectrum	inline
sortByIntensity(bool reverse=false)	MSSpectrum
sortByIonMobility()	MSSpectrum
sortByPosition()	MSSpectrum
sortByPositionPresorted(const std::vector< Chunk > &chunks)	MSSpectrum
source_file_	SpectrumSettings	protected
SpectrumSettings()	SpectrumSettings
SpectrumSettings(const SpectrumSettings &)=default	SpectrumSettings
SpectrumSettings(SpectrumSettings &&)=default	SpectrumSettings
SpectrumType enum name	SpectrumSettings
static_for_each_base_(Visitor &&visitor)	RangeManager< RangeBases... >	inlineprotectedstatic
string_data_arrays_	MSSpectrum	protected
StringDataArray typedef	MSSpectrum
StringDataArrays typedef	MSSpectrum
swap(MetaInfoInterface &rhs)	MetaInfoInterface
ThisRangeType typedef	RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >
type_	SpectrumSettings	protected
unify(const SpectrumSettings &rhs)	SpectrumSettings
UNKNOWN enum value	SpectrumSettings
updateRanges() override	MSSpectrum	virtual
~MetaInfoInterface()	MetaInfoInterface
~MSSpectrum()=default	MSSpectrum
~RangeManagerContainer()=default	RangeManagerContainer< RangeMZ, RangeIntensity, RangeMobility >	virtual
~SpectrumSettings()	SpectrumSettings