IMSAlphabetParser< AlphabetElementType, Container, InputSource > Class Template Reference

An abstract templatized parser to load the data that is used to initialize Alphabet objects. More...

#include <OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h>

Inheritance diagram for IMSAlphabetParser< AlphabetElementType, Container, InputSource >:

Public Types
typedef Container	ContainerType

Public Member Functions
void	load (const std::string &fname)
virtual ContainerType &	getElements ()=0
virtual void	parse (InputSource &is)=0
virtual	~IMSAlphabetParser ()
	Destructor.

Detailed Description

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>
class OpenMS::ims::IMSAlphabetParser< AlphabetElementType, Container, InputSource >

An abstract templatized parser to load the data that is used to initialize Alphabet objects.

AlphabetParser reads the input source, which is given as a template parameter InputSource , by load (const std::string& fname) function where fname is the source name. Loaded data can be retrieved by calling getElements().

See also

Alphabet

Member Typedef Documentation

ContainerType

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>

typedef Container ContainerType

Type of data to be loaded.

Constructor & Destructor Documentation

~IMSAlphabetParser()

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>

virtual ~IMSAlphabetParser ( )

inlinevirtual

Destructor.

Member Function Documentation

getElements()

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>

virtual ContainerType & getElements ( )

pure virtual

Gets the data that was loaded.

Returns

The data.

Implemented in IMSAlphabetTextParser.

load()

template<typename AlphabetElementType , typename Container , typename InputSource >

void load

(

const std::string &

fname

)

Loads the data from the InputSource with the name fname. If there is an error occurred while reading data from InputSource, IOException is thrown.

Parameters

[in]

fname

The name of the input source.

parse()

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>

virtual void parse ( InputSource &  is )

pure virtual

Parses the the given input source is .

Parameters

[in]

is

The InputSource