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Static Public Member Functions | Static Public Attributes | List of all members
OSWFeatureTransitionSchema Struct Reference

Schema for OpenSWATH per-transition feature scoring results table. More...

#include <OpenMS/FORMAT/ArrowSchemaRegistry.h>

Collaboration diagram for OSWFeatureTransitionSchema:
[legend]

Static Public Member Functions

static std::shared_ptr< arrow::Schema > schema ()
 

Static Public Attributes

static constexpr const char * FEATURE_ID = "feature_id"
 
static constexpr const char * RUN_ID = "run_id"
 
static constexpr const char * TRANSITION_ID = "transition_id"
 
static constexpr const char * AREA_INTENSITY = "area_intensity"
 
static constexpr const char * TOTAL_AREA_INTENSITY = "total_area_intensity"
 
static constexpr const char * APEX_INTENSITY = "apex_intensity"
 
static constexpr const char * APEX_RT = "apex_rt"
 
static constexpr const char * RT_FWHM = "rt_fwhm"
 
static constexpr const char * MASSERROR_PPM = "masserror_ppm"
 
static constexpr const char * TOTAL_MI = "total_mi"
 
static constexpr const char * VAR_INTENSITY_SCORE = "var_intensity_score"
 
static constexpr const char * VAR_INTENSITY_RATIO_SCORE = "var_intensity_ratio_score"
 
static constexpr const char * VAR_LOG_INTENSITY = "var_log_intensity"
 
static constexpr const char * VAR_XCORR_COELUTION = "var_xcorr_coelution"
 
static constexpr const char * VAR_XCORR_SHAPE = "var_xcorr_shape"
 
static constexpr const char * VAR_LOG_SN_SCORE = "var_log_sn_score"
 
static constexpr const char * VAR_MASSDEV_SCORE = "var_massdev_score"
 
static constexpr const char * VAR_MI_SCORE = "var_mi_score"
 
static constexpr const char * VAR_MI_RATIO_SCORE = "var_mi_ratio_score"
 
static constexpr const char * VAR_ISOTOPE_CORRELATION_SCORE = "var_isotope_correlation_score"
 
static constexpr const char * VAR_ISOTOPE_OVERLAP_SCORE = "var_isotope_overlap_score"
 
static constexpr const char * EXP_IM = "exp_im"
 
static constexpr const char * EXP_IM_LEFTWIDTH = "exp_im_leftwidth"
 
static constexpr const char * EXP_IM_RIGHTWIDTH = "exp_im_rightwidth"
 
static constexpr const char * DELTA_IM = "delta_im"
 
static constexpr const char * VAR_IM_DELTA_SCORE = "var_im_delta_score"
 
static constexpr const char * VAR_IM_LOG_INTENSITY = "var_im_log_intensity"
 
static constexpr const char * VAR_IM_XCORR_COELUTION_CONTRAST = "var_im_xcorr_coelution_contrast"
 
static constexpr const char * VAR_IM_XCORR_SHAPE_CONTRAST = "var_im_xcorr_shape_contrast"
 
static constexpr const char * VAR_IM_XCORR_COELUTION_COMBINED = "var_im_xcorr_coelution_combined"
 
static constexpr const char * VAR_IM_XCORR_SHAPE_COMBINED = "var_im_xcorr_shape_combined"
 
static constexpr const char * START_POSITION_AT_5 = "start_position_at_5"
 
static constexpr const char * END_POSITION_AT_5 = "end_position_at_5"
 
static constexpr const char * START_POSITION_AT_10 = "start_position_at_10"
 
static constexpr const char * END_POSITION_AT_10 = "end_position_at_10"
 
static constexpr const char * START_POSITION_AT_50 = "start_position_at_50"
 
static constexpr const char * END_POSITION_AT_50 = "end_position_at_50"
 
static constexpr const char * TOTAL_WIDTH = "total_width"
 
static constexpr const char * TAILING_FACTOR = "tailing_factor"
 
static constexpr const char * ASYMMETRY_FACTOR = "asymmetry_factor"
 
static constexpr const char * SLOPE_OF_BASELINE = "slope_of_baseline"
 
static constexpr const char * BASELINE_DELTA_2_HEIGHT = "baseline_delta_2_height"
 
static constexpr const char * POINTS_ACROSS_BASELINE = "points_across_baseline"
 
static constexpr const char * POINTS_ACROSS_HALF_HEIGHT = "points_across_half_height"
 

Detailed Description

Schema for OpenSWATH per-transition feature scoring results table.

Member Function Documentation

◆ schema()

static std::shared_ptr< arrow::Schema > schema ( )
static

Member Data Documentation

◆ APEX_INTENSITY

constexpr const char* APEX_INTENSITY = "apex_intensity"
staticconstexpr

◆ APEX_RT

constexpr const char* APEX_RT = "apex_rt"
staticconstexpr

◆ AREA_INTENSITY

constexpr const char* AREA_INTENSITY = "area_intensity"
staticconstexpr

◆ ASYMMETRY_FACTOR

constexpr const char* ASYMMETRY_FACTOR = "asymmetry_factor"
staticconstexpr

◆ BASELINE_DELTA_2_HEIGHT

constexpr const char* BASELINE_DELTA_2_HEIGHT = "baseline_delta_2_height"
staticconstexpr

◆ DELTA_IM

constexpr const char* DELTA_IM = "delta_im"
staticconstexpr

◆ END_POSITION_AT_10

constexpr const char* END_POSITION_AT_10 = "end_position_at_10"
staticconstexpr

◆ END_POSITION_AT_5

constexpr const char* END_POSITION_AT_5 = "end_position_at_5"
staticconstexpr

◆ END_POSITION_AT_50

constexpr const char* END_POSITION_AT_50 = "end_position_at_50"
staticconstexpr

◆ EXP_IM

constexpr const char* EXP_IM = "exp_im"
staticconstexpr

◆ EXP_IM_LEFTWIDTH

constexpr const char* EXP_IM_LEFTWIDTH = "exp_im_leftwidth"
staticconstexpr

◆ EXP_IM_RIGHTWIDTH

constexpr const char* EXP_IM_RIGHTWIDTH = "exp_im_rightwidth"
staticconstexpr

◆ FEATURE_ID

constexpr const char* FEATURE_ID = "feature_id"
staticconstexpr

◆ MASSERROR_PPM

constexpr const char* MASSERROR_PPM = "masserror_ppm"
staticconstexpr

◆ POINTS_ACROSS_BASELINE

constexpr const char* POINTS_ACROSS_BASELINE = "points_across_baseline"
staticconstexpr

◆ POINTS_ACROSS_HALF_HEIGHT

constexpr const char* POINTS_ACROSS_HALF_HEIGHT = "points_across_half_height"
staticconstexpr

◆ RT_FWHM

constexpr const char* RT_FWHM = "rt_fwhm"
staticconstexpr

◆ RUN_ID

constexpr const char* RUN_ID = "run_id"
staticconstexpr

◆ SLOPE_OF_BASELINE

constexpr const char* SLOPE_OF_BASELINE = "slope_of_baseline"
staticconstexpr

◆ START_POSITION_AT_10

constexpr const char* START_POSITION_AT_10 = "start_position_at_10"
staticconstexpr

◆ START_POSITION_AT_5

constexpr const char* START_POSITION_AT_5 = "start_position_at_5"
staticconstexpr

◆ START_POSITION_AT_50

constexpr const char* START_POSITION_AT_50 = "start_position_at_50"
staticconstexpr

◆ TAILING_FACTOR

constexpr const char* TAILING_FACTOR = "tailing_factor"
staticconstexpr

◆ TOTAL_AREA_INTENSITY

constexpr const char* TOTAL_AREA_INTENSITY = "total_area_intensity"
staticconstexpr

◆ TOTAL_MI

constexpr const char* TOTAL_MI = "total_mi"
staticconstexpr

◆ TOTAL_WIDTH

constexpr const char* TOTAL_WIDTH = "total_width"
staticconstexpr

◆ TRANSITION_ID

constexpr const char* TRANSITION_ID = "transition_id"
staticconstexpr

◆ VAR_IM_DELTA_SCORE

constexpr const char* VAR_IM_DELTA_SCORE = "var_im_delta_score"
staticconstexpr

◆ VAR_IM_LOG_INTENSITY

constexpr const char* VAR_IM_LOG_INTENSITY = "var_im_log_intensity"
staticconstexpr

◆ VAR_IM_XCORR_COELUTION_COMBINED

constexpr const char* VAR_IM_XCORR_COELUTION_COMBINED = "var_im_xcorr_coelution_combined"
staticconstexpr

◆ VAR_IM_XCORR_COELUTION_CONTRAST

constexpr const char* VAR_IM_XCORR_COELUTION_CONTRAST = "var_im_xcorr_coelution_contrast"
staticconstexpr

◆ VAR_IM_XCORR_SHAPE_COMBINED

constexpr const char* VAR_IM_XCORR_SHAPE_COMBINED = "var_im_xcorr_shape_combined"
staticconstexpr

◆ VAR_IM_XCORR_SHAPE_CONTRAST

constexpr const char* VAR_IM_XCORR_SHAPE_CONTRAST = "var_im_xcorr_shape_contrast"
staticconstexpr

◆ VAR_INTENSITY_RATIO_SCORE

constexpr const char* VAR_INTENSITY_RATIO_SCORE = "var_intensity_ratio_score"
staticconstexpr

◆ VAR_INTENSITY_SCORE

constexpr const char* VAR_INTENSITY_SCORE = "var_intensity_score"
staticconstexpr

◆ VAR_ISOTOPE_CORRELATION_SCORE

constexpr const char* VAR_ISOTOPE_CORRELATION_SCORE = "var_isotope_correlation_score"
staticconstexpr

◆ VAR_ISOTOPE_OVERLAP_SCORE

constexpr const char* VAR_ISOTOPE_OVERLAP_SCORE = "var_isotope_overlap_score"
staticconstexpr

◆ VAR_LOG_INTENSITY

constexpr const char* VAR_LOG_INTENSITY = "var_log_intensity"
staticconstexpr

◆ VAR_LOG_SN_SCORE

constexpr const char* VAR_LOG_SN_SCORE = "var_log_sn_score"
staticconstexpr

◆ VAR_MASSDEV_SCORE

constexpr const char* VAR_MASSDEV_SCORE = "var_massdev_score"
staticconstexpr

◆ VAR_MI_RATIO_SCORE

constexpr const char* VAR_MI_RATIO_SCORE = "var_mi_ratio_score"
staticconstexpr

◆ VAR_MI_SCORE

constexpr const char* VAR_MI_SCORE = "var_mi_score"
staticconstexpr

◆ VAR_XCORR_COELUTION

constexpr const char* VAR_XCORR_COELUTION = "var_xcorr_coelution"
staticconstexpr

◆ VAR_XCORR_SHAPE

constexpr const char* VAR_XCORR_SHAPE = "var_xcorr_shape"
staticconstexpr