ListUtils Class Reference

Collection of utility functions for management of vectors. More...

#include <OpenMS/DATASTRUCTURES/ListUtils.h>

Classes
struct	DoubleTolerancePredicate_
	Predicate to check double equality with a given tolerance. More...

Public Types
enum class	CASE { SENSITIVE , INSENSITIVE }

Public Member Functions
template<>
std::vector< String >	create (const std::vector< String > &s)
	create specialization for String since we do not need to cast here More...

Static Public Member Functions
template<typename T >
static std::vector< T >	create (const String &str, const char splitter=',')
	Returns a list that is created by splitting the given comma-separated string. More...
template<typename T >
static std::vector< T >	create (const std::vector< String > &s)
	Converts a vector of strings to a vector of the target type T. More...
template<typename T >
static std::vector< String >	toStringList (const std::vector< T > &s)
	Converts a vector of T's to a vector of Strings. More...
template<typename T , typename E >
static bool	contains (const std::vector< T > &container, const E &elem)
	Checks whether the element elem is contained in the given container. More...
static bool	contains (const std::vector< double > &container, const double &elem, double tolerance=0.00001)
	Checks whether the element elem is contained in the given container of floating point numbers. More...
static bool	contains (const std::vector< String > &container, String elem, const CASE cs)
	Checks whether the String elem is contained in the given container (potentially case insensitive) More...
template<typename T >
static String	concatenate (const std::vector< T > &container, const String &glue="")
	Concatenates all elements of the container and puts the glue string between elements. More...
template<typename T >
static String	concatenate (const T &container, const String &glue="")
	Concatenates all elements of the container and puts the glue string between elements. More...
template<typename T , typename E >
static Int	getIndex (const std::vector< T > &container, const E &elem)
	Get the index of the first occurrence of an element in the vector (or -1 if not found) More...

Detailed Description

Collection of utility functions for management of vectors.

Member Enumeration Documentation

CASE

enum CASE

strong

Enumerator
SENSITIVE
INSENSITIVE

Member Function Documentation

concatenate() [1/2]

static String concatenate ( const std::vector< T > &  container, const String &  glue = ""  )

inlinestatic

Concatenates all elements of the container and puts the glue string between elements.

Parameters

container	The container to concatenate;
glue	The string to add in between elements.

Referenced by ProteinIdentification::Mapping::create(), and NucleicAcidSearchEngine::generateLFQInput_().

concatenate() [2/2]

static String concatenate ( const T &  container, const String &  glue = ""  )

inlinestatic

Concatenates all elements of the container and puts the glue string between elements.

Parameters

container	The container <T> to concatenate; must have begin() and end() iterator.
glue	The string to add in between elements.

contains() [1/3]

static bool contains ( const std::vector< double > &  container, const double &  elem, double  tolerance = 0.00001  )

inlinestatic

Checks whether the element elem is contained in the given container of floating point numbers.

Parameters

container	The container of doubles to check.
elem	The element to check whether it is in the container or not.
tolerance	The allowed tolerance for the double.

Returns

True if elem is contained in container, false otherwise.

contains() [2/3]

static bool contains ( const std::vector< String > &  container, String  elem, const CASE  cs  )

inlinestatic

Checks whether the String elem is contained in the given container (potentially case insensitive)

Parameters

container	The container of String to check.
elem	The element to check whether it is in the container or not.
case_sensitive	Do the comparison case sensitive or insensitive

Returns

True if elem is contained in container, false otherwise.

References String::toLower().

contains() [3/3]

static bool contains ( const std::vector< T > &  container, const E &  elem  )

inlinestatic

Checks whether the element elem is contained in the given container.

Parameters

container	The container to check.
elem	The element to check whether it is in the container or not.

Returns

True if elem is contained in container, false otherwise.

References seqan::find().

Referenced by HasActivationMethod< SpectrumType >::operator()().

create() [1/3]

std::vector< T > create ( const std::vector< String > &  s )

inlinestatic

Converts a vector of strings to a vector of the target type T.

Note

The strings are trimmed before conversion.

The values get converted by boost::lexical_cast so a valid conversion from String to T needs to be available.

Parameters

s	The vector of strings that should be converted.

Returns

A vector containing the elements of input vector converted into type T.

References OpenMS::Constants::c, and String::trim().

create() [2/3]

std::vector<String> create ( const std::vector< String > &  s )

inline

create specialization for String since we do not need to cast here

create() [3/3]

static std::vector<T> create ( const String &  str, const char  splitter = ','  )

inlinestatic

Returns a list that is created by splitting the given comma-separated string.

Note

If converted to vector<String> the strings are not trimmed.

The values get converted by boost::lexical_cast so a valid conversion from String to T needs to be available.

Parameters

str	The string that should be split and converted to a list.

Returns

A vector containing the elements of the string converted into type T.

References String::split().

getIndex()

static Int getIndex ( const std::vector< T > &  container, const E &  elem  )

inlinestatic

Get the index of the first occurrence of an element in the vector (or -1 if not found)

References seqan::find().

toStringList()

static std::vector<String> toStringList ( const std::vector< T > &  s )

inlinestatic

Converts a vector of T's to a vector of Strings.

Parameters

s	The vector of T's that should be converted.

Returns

A vector containing the elements of input vector converted into Strings.