SiriusAdapterAlgorithm::ParameterSection Class Reference

Inheritance diagram for SiriusAdapterAlgorithm::ParameterSection:

Collaboration diagram for SiriusAdapterAlgorithm::ParameterSection:

Public Member Functions
virtual	~ParameterSection ()=default
DataValue	getValue (const String &param_name) const
QStringList	getCommandLine () const

Protected Member Functions
ParameterModifier	parameter (const String &parameter_name, const ParamValue &default_value, const String &parameter_description)
void	flag (const String &parameter_name, const String &parameter_description)
	ParameterSection (SiriusAdapterAlgorithm *enclose)
virtual void	parameters ()=0
virtual String	sectionName () const =0

Protected Attributes
SiriusAdapterAlgorithm *	enclose

Private Member Functions
String	toFullParameter (const String &param_name) const

Private Attributes
unordered_map< String, String >	openms_to_sirius

Constructor & Destructor Documentation

ParameterSection()

ParameterSection ( SiriusAdapterAlgorithm *  enclose )

inlineexplicitprotected

~ParameterSection()

virtual ~ParameterSection ( )

virtualdefault

Member Function Documentation

flag()

void flag ( const String &  parameter_name, const String &  parameter_description  )

protected

getCommandLine()

QStringList getCommandLine ( ) const

inline

References DefaultParamHandler::defaults_, Param::getValue(), DataValue::isEmpty(), DefaultParamHandler::param_, String::toQString(), and DataValue::toString().

getValue()

DataValue getValue ( const String &  param_name ) const

inline

References Param::getValue(), and DefaultParamHandler::param_.

parameter()

ParameterModifier parameter ( const String &  parameter_name, const ParamValue &  default_value, const String &  parameter_description  )

protected

parameters()

virtual void parameters ( )

protectedpure virtual

Implemented in SiriusAdapterAlgorithm::Passatutto, SiriusAdapterAlgorithm::Fingerid, SiriusAdapterAlgorithm::Sirius, SiriusAdapterAlgorithm::Project, and SiriusAdapterAlgorithm::Preprocessing.

sectionName()

virtual String sectionName ( ) const

protectedpure virtual

Implemented in SiriusAdapterAlgorithm::Passatutto, SiriusAdapterAlgorithm::Fingerid, SiriusAdapterAlgorithm::Sirius, SiriusAdapterAlgorithm::Project, and SiriusAdapterAlgorithm::Preprocessing.

toFullParameter()

String toFullParameter ( const String &  param_name ) const

inlineprivate

References String::substitute().

Member Data Documentation

enclose

SiriusAdapterAlgorithm* enclose

protected

openms_to_sirius

unordered_map<String, String> openms_to_sirius

private