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Public Member Functions | Public Attributes | List of all members
LightTransition Struct Reference

#include <OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h>

Collaboration diagram for LightTransition:
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Public Member Functions

int getProductChargeState () const
 
bool isProductChargeStateSet () const
 
bool isPrecursorImSet () const
 
std::string getNativeID () const
 
std::string getPeptideRef () const
 
std::string getCompoundRef () const
 
double getLibraryIntensity () const
 
void setLibraryIntensity (double l)
 
double getProductMZ () const
 
double getPrecursorMZ () const
 
double getPrecursorIM () const
 
void setDetectingTransition (bool d)
 
bool isDetectingTransition () const
 
void setQuantifyingTransition (bool q)
 
bool isQuantifyingTransition () const
 
void setIdentifyingTransition (bool i)
 
bool isIdentifyingTransition () const
 

Public Attributes

std::string transition_name
 
std::string peptide_ref
 
double library_intensity {}
 
double product_mz {}
 
double precursor_mz {}
 
double precursor_im {-1}
 
int fragment_charge {}
 
bool decoy {}
 
bool detecting_transition {}
 
bool quantifying_transition {}
 
bool identifying_transition {}
 

Member Function Documentation

◆ getCompoundRef()

std::string getCompoundRef ( ) const
inline

References LightTransition::peptide_ref.

◆ getLibraryIntensity()

double getLibraryIntensity ( ) const
inline

References LightTransition::library_intensity.

◆ getNativeID()

std::string getNativeID ( ) const
inline

References LightTransition::transition_name.

◆ getPeptideRef()

std::string getPeptideRef ( ) const
inline

References LightTransition::peptide_ref.

◆ getPrecursorIM()

double getPrecursorIM ( ) const
inline

References LightTransition::precursor_im.

◆ getPrecursorMZ()

double getPrecursorMZ ( ) const
inline

References LightTransition::precursor_mz.

◆ getProductChargeState()

int getProductChargeState ( ) const
inline

References LightTransition::fragment_charge.

◆ getProductMZ()

double getProductMZ ( ) const
inline

References LightTransition::product_mz.

◆ isDetectingTransition()

bool isDetectingTransition ( ) const
inline

References LightTransition::detecting_transition.

◆ isIdentifyingTransition()

bool isIdentifyingTransition ( ) const
inline

References LightTransition::identifying_transition.

◆ isPrecursorImSet()

bool isPrecursorImSet ( ) const
inline

References LightTransition::precursor_im.

◆ isProductChargeStateSet()

bool isProductChargeStateSet ( ) const
inline

References LightTransition::fragment_charge.

◆ isQuantifyingTransition()

bool isQuantifyingTransition ( ) const
inline

References LightTransition::quantifying_transition.

◆ setDetectingTransition()

void setDetectingTransition ( bool  d)
inline

References LightTransition::detecting_transition.

◆ setIdentifyingTransition()

void setIdentifyingTransition ( bool  i)
inline

References LightTransition::identifying_transition.

◆ setLibraryIntensity()

void setLibraryIntensity ( double  l)
inline

References LightTransition::library_intensity.

◆ setQuantifyingTransition()

void setQuantifyingTransition ( bool  q)
inline

References LightTransition::quantifying_transition.

Member Data Documentation

◆ decoy

bool decoy {}

◆ detecting_transition

bool detecting_transition {}

Referenced by LightTransition::isDetectingTransition(), and LightTransition::setDetectingTransition().

◆ fragment_charge

int fragment_charge {}

Referenced by LightTransition::getProductChargeState(), and LightTransition::isProductChargeStateSet().

◆ identifying_transition

bool identifying_transition {}

Referenced by LightTransition::isIdentifyingTransition(), and LightTransition::setIdentifyingTransition().

◆ library_intensity

double library_intensity {}

Referenced by LightTransition::getLibraryIntensity(), and LightTransition::setLibraryIntensity().

◆ peptide_ref

std::string peptide_ref

Referenced by LightTransition::getCompoundRef(), and LightTransition::getPeptideRef().

◆ precursor_im

double precursor_im {-1}

Referenced by LightTransition::getPrecursorIM(), and LightTransition::isPrecursorImSet().

◆ precursor_mz

double precursor_mz {}

Referenced by LightTransition::getPrecursorMZ().

◆ product_mz

double product_mz {}

Referenced by LightTransition::getProductMZ().

◆ quantifying_transition

bool quantifying_transition {}

Referenced by LightTransition::isQuantifyingTransition(), and LightTransition::setQuantifyingTransition().

◆ transition_name

std::string transition_name

Referenced by LightTransition::getNativeID().