Here is a list of all class members with links to the classes they belong to:
- u -
- U
: BALL::Element
- u11
: BALL::PDB::RecordANISOU
- u12
: BALL::PDB::RecordANISOU
- u13
: BALL::PDB::RecordANISOU
- u22
: BALL::PDB::RecordANISOU
- u23
: BALL::PDB::RecordANISOU
- u33
: BALL::PDB::RecordANISOU
- U_
: BALL::QSAR::KPLSModel
, BALL::QSAR::PLSModel
- u_
: BALL::RandomNumberGenerator
- U_CHANNEL
: BALL::VIEW::ChannelFormat
- UCK()
: BALL::UCK
- uck_str_
: BALL::UCK
- uhlig_
: BALL::NonpolarSolvation
- UHLIG_CONSTANT
: BALL::NonpolarSolvation::Option
, BALL::NonpolarSolvation::Default
- UhligCavFreeEnergyProcessor()
: BALL::UhligCavFreeEnergyProcessor
- ui
: BALL::VIEW::GridColorWidget
- ui_
: BALL::VIEW::PubChemDialog
, BALL::VIEW::PropEditorWidget
, BALL::VIEW::PDBInfoEditorWidget::EditorPDBInfoDialog
, BALL::VIEW::PropertyEditor
- UIntEditorWidget()
: BALL::VIEW::UIntEditorWidget
- UnaryProcessor()
: BALL::UnaryProcessor< T >
- unassigned_atoms_
: BALL::Templates
, BALL::ScoringFunction
, BALL::AssignBaseProcessor
, BALL::ForceField
, BALL::MMFF94ChargeProcessor
- unassigned_bonds_
: BALL::Kekuliser
- unbind()
: BALL::Substring
- UnboundSubstring()
: BALL::Substring::UnboundSubstring
- uncharged_double
: BALL::Kekuliser::AtomInfo
- UnconnectedGraphException()
: BALL::GRAPH::UnconnectedGraphException
- undef_act_class_id_
: BALL::QSAR::BayesModel
- UNDEFINED
: BALL::INIFile
, BALL::ParameterSection
, BALL::VIEW::DatasetMessage
, BALL::VIEW::CompositeMessage
, BALL::VIEW::SceneMessage
, BALL::VIEW::RepresentationMessage
, BALL::VIEW::MolecularTaskMessage
- undo()
: BALL::GRAPH::UndoEliminateOperation< UndirectedGraph >
, BALL::VIEW::EditOperationDialog
- undo_
: BALL::VIEW::EditableScene
- UndoEliminateOperation()
: BALL::GRAPH::UndoEliminateOperation< UndirectedGraph >
- UndoManagerDialog()
: BALL::VIEW::UndoManagerDialog
- UNIFORM
: BALL::FDPB::ChargeDistribution
, BALL::FDPB::DielectricSmoothing
- Uninitialized()
: BALL::Exception::Uninitialized
- unit_
: BALL::HashGrid3< Item >
, BALL::Descriptor
- unit_cell
: BALL::PDB::RecordCRYST1
- UNIT_VALUE
: BALL::ShiftedLVMMMinimizer
- UNITCELL
: BALL::CrystalGenerator
- unitcell_
: BALL::CrystalGenerator
- unitcell_info
: BALL::PDB::Structure
- UnitCellInfo()
: BALL::PDB::Structure::UnitCellInfo
- UNITE_ATOMS
: BALL::PolarSolvation::Option
, BALL::PolarSolvation::Default
- unite_atoms_
: BALL::PolarSolvation
- uniteAtoms_()
: BALL::PolarSolvation
- units
: BALL::NMRStarFile::SampleCondition
- UNKNOWN
: BALL::Element
, BALL::SecondaryStructure
, BALL::CosineTorsion
, BALL::Potential1210
, BALL::QuadraticAngleBend
, BALL::QuadraticBondStretch
, BALL::QuadraticImproperTorsion
, BALL::FresnoTypes
- UNKNOWN_RESIDUES
: BALL::ResidueChecker
- unknown_shortcuts_
: BALL::VIEW::ShortcutRegistry
- UNKNOWN_TYPE
: BALL::Atom
, BALL::RDFSection
- unloadAllPlugins()
: BALL::PluginManager
- unloadPlugin()
: BALL::PluginManager
- unlockComposites()
: BALL::VIEW::ModularWidget
- unlockCompositesFor()
: BALL::VIEW::MainControl
- unlockGLContext()
: BALL::VIEW::GLRenderWindow
- unmap()
: BALL::VIEW::PyWidget
- unmark_()
: BALL::DNAMutator
- unproject()
: BALL::Pair6_12RDFIntegrator
, BALL::PairExpRDFIntegrator
- unregister()
: BALL::LogStreamNotifier
- unregisterChildEntry()
: BALL::VIEW::PluginDialog
- unregisterConnectionObject()
: BALL::VIEW::ConnectionObject
- unregisterForHelpSystem()
: BALL::VIEW::HelpViewer
- unregisterInstance_()
: BALL::Embeddable
- unregisterModule()
: BALL::ShiftModel
- unregisterObject_()
: BALL::VIEW::PreferencesEntry
- unregisterObjectCreator()
: BALL::VIEW::ServerWidget
- unregisterThis()
: BALL::Embeddable
- unregisterTransformation()
: BALL::TransformationManager
, BALL::File
- unscaled_direction_
: BALL::ConjugateGradientMinimizer
- unsetFinished()
: BALL::ConnectedToPredicate::CTPNode
- unsetLinked()
: BALL::ConnectedToPredicate::CTPNode
- unsetSSSR()
: BALL::SmartsMatcher
- UNSIGNED_INT
: BALL::NamedProperty
- UNSIGNED_INT_CHANNEL
: BALL::VIEW::ChannelFormat
- unsupported_images_
: BALL::VIEW::DownloadElectronDensity
, BALL::VIEW::DownloadPDBFile
- UNUNBIUM
: BALL::Element
- UNUNNILIUM
: BALL::Element
- UNUNNINIUM
: BALL::Element
- update()
: BALL::AmberNonBonded
, BALL::ForceField
, BALL::ForceFieldComponent
, BALL::MMFF94NonBonded
, BALL::VIEW::LightSettings
, BALL::VIEW::MainControl
, BALL::VIEW::Representation
- UPDATE
: BALL::VIEW::DatasetMessage
, BALL::VIEW::RepresentationMessage
- update_()
: BALL::VIEW::SnapshotVisualisationDialog
, BALL::VIEW::Representation
, BALL::VIEW::RepresentationManager
- update_always_needed_
: BALL::VIEW::ColorProcessor
- UPDATE_CAMERA
: BALL::VIEW::SceneMessage
- UPDATE_METHOD
: BALL::ConjugateGradientMinimizer::Default
, BALL::ShiftedLVMMMinimizer::Option
, BALL::ShiftedLVMMMinimizer::Default
, BALL::ConjugateGradientMinimizer::Option
- update_mutex_
: BALL::VIEW::RepresentationManager
- update_representations_
: BALL::VIEW::CompositeMessage
- update_running_
: BALL::VIEW::Scene
- update_time_stamp_
: BALL::ForceField
- updateAdditionalAtomInfo_()
: BALL::PDBFile
- updateAlwaysNeeded()
: BALL::VIEW::ColorProcessor
- updateBackgroundColor()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::RenderSetup
, BALL::VIEW::TilingRenderer
- updateBendEnergy()
: BALL::MMFF94StretchBend
- updateBendForces()
: BALL::MMFF94StretchBend
- updateCamera()
: BALL::VIEW::GLRenderer
, BALL::VIEW::Renderer
, BALL::VIEW::RenderSetup
, BALL::VIEW::TilingRenderer
- updateClippingPlanes()
: BALL::VIEW::GeometricControl
- updateContextMenu()
: BALL::VIEW::MolecularControl
- updateDirection()
: BALL::ConjugateGradientMinimizer
, BALL::EnergyMinimizer
, BALL::ShiftedLVMMMinimizer
, BALL::SteepestDescentMinimizer
, BALL::StrangLBFGSMinimizer
- updateDirectlyBoxChanged()
: BALL::VIEW::MaterialSettings
- updateDownloadProgress()
: BALL::VIEW::PubChemDialog
- updateEdge()
: BALL::SESComputer
- updateEditorGeometry()
: BALL::VIEW::ComboBoxDelegate
- updateEnergy()
: BALL::MMFF94Torsion
, BALL::EnergyMinimizer
, BALL::AmberTorsion
, BALL::AmberNonBonded
, BALL::CharmmImproperTorsion
, BALL::CharmmNonBonded
, BALL::CharmmTorsion
, BALL::BendComponent
, BALL::ForceField
, BALL::ForceFieldComponent
, BALL::StretchComponent
, BALL::MMFF94NonBonded
, BALL::MMFF94OutOfPlaneBend
, BALL::MMFF94StretchBend
, BALL::ChemScoreMetal
- updateFaceAndEdges()
: BALL::RSComputer
- updateFile()
: BALL::VIEW::FileObserver
- updateForces()
: BALL::AmberTorsion
, BALL::CharmmImproperTorsion
, BALL::CharmmNonBonded
, BALL::CharmmTorsion
, BALL::BendComponent
, BALL::ForceField
, BALL::ForceFieldComponent
, BALL::EnergyMinimizer
, BALL::MMFF94NonBonded
, BALL::MMFF94OutOfPlaneBend
, BALL::MMFF94Torsion
, BALL::ChemScoreMetal
, BALL::AmberNonBonded
, BALL::MMFF94StretchBend
, BALL::StretchComponent
- updateFromStage()
: BALL::VIEW::LightSettings
, BALL::VIEW::StageSettings
- updateFrozenBonds_()
: BALL::RotationalEntropyLoss
- updateGL()
: BALL::VIEW::Scene
- updateImageTile()
: BALL::VIEW::GLOffscreenTarget
- updateInstantaneousTemperature()
: BALL::MolecularDynamics
- updateLineNumbers()
: BALL::VIEW::TextEditorWidget
- updateLineNumbersWidth()
: BALL::VIEW::TextEditorWidget
- UpdateMethod
: BALL::ConjugateGradientMinimizer
, BALL::ShiftedLVMMMinimizer
- updateMolecules()
: BALL::PeriodicBoundary
- updateOfRepresentationRunning()
: BALL::VIEW::MainControl
- updatePointers_()
: BALL::PersistenceManager
- updateProgress_()
: BALL::VIEW::DockProgressDialog
- updateRepLabel_()
: BALL::VIEW::MainControl
- updateRepresentation()
: BALL::VIEW::GeometricControl
- updateRepresentations()
: BALL::VIEW::CompositeMessage
- updateRepresentationsOf()
: BALL::VIEW::MainControl
- UpdateRepresentationThread()
: BALL::VIEW::UpdateRepresentationThread
, BALL::VIEW::Representation
, BALL::VIEW::RepresentationManager
- updateRunning()
: BALL::VIEW::RepresentationManager
- updateSelection()
: BALL::VIEW::GenericControl
, BALL::VIEW::DatasetControl
, BALL::VIEW::GeometricControl
, BALL::VIEW::MolecularControl
- updateSelection_()
: BALL::Composite
- updateStretchBendEnergy()
: BALL::MMFF94StretchBend
- updateStretchBendForces()
: BALL::MMFF94StretchBend
- updateStretchEnergy()
: BALL::MMFF94StretchBend
- updateStretchForces()
: BALL::MMFF94StretchBend
- updateStructure_()
: BALL::VIEW::BALLThread
- updateText_()
: BALL::VIEW::EditSingleShortcut
- updateWeights()
: BALL::QSAR::FeatureSelection
- updt_method_
: BALL::ConjugateGradientMinimizer
, BALL::ShiftedLVMMMinimizer
- updt_u_
: BALL::ShiftedLVMMMinimizer
- updt_v_
: BALL::ShiftedLVMMMinimizer
- uploadFileToBuffer()
: BALL::SimpleDownloader
- uploadFileToFile()
: BALL::SimpleDownloader
- uploadStringToBuffer()
: BALL::SimpleDownloader
- uploadStringToFile()
: BALL::SimpleDownloader
- UPPER
: BALL::FDPB::Option
- upper_
: BALL::VIEW::SDWidget
, BALL::ScoringBaseFunction
, BALL::BoundingBoxProcessor
, BALL::FDPB
, BALL::HBondProcessor
- upper_bound
: BALL::TreeWidthImplementation< EditableGraph >::QuickBB< Lowerbound, Upperbound >
- upper_bound_
: BALL::CubicSpline1D
, BALL::FPTBondOrderStrategy::DPBackTrackingCombiner_
, BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_
, BALL::FPTBondOrderStrategy::DPBackTracking_
- upper_derivative_
: BALL::CubicSpline1D
- UPPER_PENALTY_BOUND
: BALL::FPTBondOrderStrategy::Option
, BALL::FPTBondOrderStrategy::Default
- UPPERCASE
: BALL::RegularExpression
- UPThread()
: BALL::SimpleDownloaderHelper::UPThread
- upwardClicked()
: BALL::VIEW::DockResultDialog
- URANIUM
: BALL::Element
- url_
: BALL::VIEW::ShowHelpMessage
, BALL::SimpleDownloaderHelper::QFtpHackThread
, BALL::SimpleDownloaderHelper::HelperThread
, BALL::SimpleDownloader
, BALL::VIEW::RegisterHelpSystemMessage
- use_async_io_
: BALL::TCPServerThread
- use_atoms_
: BALL::VIEW::FieldLineCreator
- use_averaging_
: BALL::CreateSpectrumProcessor
- use_continuous_loop_
: BALL::VIEW::RenderSetup
, BALL::VIEW::Renderer
- use_cut_off_
: BALL::HaighMallionShiftProcessor
- use_dist_depend_dielectric_
: BALL::CharmmNonBonded
, BALL::AmberNonBonded
- USE_EEF1
: BALL::CharmmFF::Option
, BALL::CharmmFF::Default
- USE_FINE_PENALTY
: BALL::AssignBondOrderProcessor::Option
, BALL::AssignBondOrderProcessor::Default
- use_fine_penalty_
: BALL::AssignBondOrderProcessor
- use_formal_charges_
: BALL::Kekuliser
- use_gb_
: BALL::PolarSolvation
- use_ignore_table_
: BALL::CreateSpectrumProcessor
- use_nu_
: BALL::QSAR::LibsvmModel
- use_offset_
: BALL::FDPB
, BALL::VIEW::RenderSetup
- USE_OUTSIDE_COLOR
: BALL::VIEW::InterpolateColorProcessor
- use_pixel_buffer_
: BALL::VIEW::GLOffscreenTarget
- use_potential_grid_
: BALL::VIEW::FieldLineCreator
- use_preview_
: BALL::VIEW::Scene
- USE_RDF
: BALL::PairExpInteractionEnergyProcessor::Option
, BALL::Pair6_12InteractionEnergyProcessor::Default
, BALL::Pair6_12InteractionEnergyProcessor::Option
, BALL::PairExpInteractionEnergyProcessor::Default
- use_residue_torsion_list_
: BALL::CharmmTorsion
- use_selection_
: BALL::ForceField
- use_shrinking_
: BALL::QSAR::LibsvmModel
- use_solvation_component_
: BALL::CharmmNonBonded
- use_vertex_buffer_
: BALL::VIEW::GLRenderer
- useCompileAndExecuteMode()
: BALL::VIEW::GLDisplayList
- useCompileMode()
: BALL::VIEW::GLDisplayList
- useContinuousLoop()
: BALL::VIEW::RenderSetup
, BALL::VIEW::Renderer
- usecs_
: BALL::PreciseTime
- used_atoms_
: BALL::VIEW::AtomBondModelBaseProcessor
- useFormalCharges()
: BALL::Kekuliser
- useMicroCanonical()
: BALL::VIEW::MolecularDynamicsDialog
- useMultithreading()
: BALL::VIEW::MainControl
- usePreview()
: BALL::VIEW::Scene
- USER
: BALL::VIEW::MainControl
- Uub
: BALL::Element
- Uun
: BALL::Element
- Uuu
: BALL::Element