charges_ | BALL::HMOFile | protected |
clear() | BALL::HMOFile | virtual |
close() | BALL::File | |
col_buffer_ | BALL::LineBasedFile | protected |
comments_ | BALL::HMOFile | protected |
copy(String source_name, String destination_name, Size buffer_size=4096) | BALL::File | static |
copyTo(const String &destination_name, Size buffer_size=4096) | BALL::File | |
created_temp_filenames_ | BALL::File | protectedstatic |
createTemporaryFilename(String &temporary, const String &suffix=".TMP") | BALL::File | static |
disableTransformation(Transformation transformation) | BALL::File | static |
ElementType enum name | BALL::HMOFile | |
enableTransformation(Transformation transformation) | BALL::File | static |
enableTrimWhitespaces(bool state) | BALL::LineBasedFile | |
File() | BALL::File | |
File(const String &name, OpenMode open_mode=std::ios::in) | BALL::File | |
getCharges() | BALL::HMOFile | inline |
getCharges() const | BALL::HMOFile | inline |
getComments() | BALL::HMOFile | inline |
getComments() const | BALL::HMOFile | inline |
getField(Index pos=0, const String "es="", const String &delimiters=String::CHARACTER_CLASS__WHITESPACE) const | BALL::LineBasedFile | |
getFileStream() | BALL::File | |
getLine() const | BALL::LineBasedFile | |
getLine() | BALL::LineBasedFile | |
getLineNumber() const | BALL::LineBasedFile | |
getName() const | BALL::File | |
getOpenMode() const | BALL::File | |
getOriginalName() const | BALL::File | |
getSize() | BALL::File | |
getSize(String name) | BALL::File | static |
getTransformationManager() | BALL::File | |
getTransformationManager() const | BALL::File | |
getType(String name, bool trace_link) | BALL::File | static |
getType(bool trace_link) const | BALL::File | |
gotoLine(Position line_number) | BALL::LineBasedFile | |
H20 enum value | BALL::HMOFile | |
H8 enum value | BALL::HMOFile | |
has(const String &text) const | BALL::LineBasedFile | |
hasCharges() const | BALL::HMOFile | inline |
hasComments() const | BALL::HMOFile | inline |
HMOFile() | BALL::HMOFile | |
HMOFile(const String &filename, File::OpenMode open_mode=std::ios::in) | BALL::HMOFile | |
is_open_ | BALL::File | protected |
is_temporary_ | BALL::File | protected |
isAccessible(String name) | BALL::File | static |
isAccessible() const | BALL::File | |
isCanonized() const | BALL::File | |
isClosed() const | BALL::File | |
isExecutable(String name) | BALL::File | static |
isExecutable() const | BALL::File | |
isOpen() const | BALL::File | |
isReadable(String name) | BALL::File | static |
isReadable() const | BALL::File | |
isTransformationEnabled(Transformation transformation) | BALL::File | static |
isValid() const | BALL::File | |
isWritable(String name) | BALL::File | static |
isWritable() const | BALL::File | |
L2 enum value | BALL::HMOFile | |
L3 enum value | BALL::HMOFile | |
line_ | BALL::LineBasedFile | protected |
line_number_ | BALL::LineBasedFile | protected |
LineBasedFile() | BALL::LineBasedFile | |
LineBasedFile(const String &filename, File::OpenMode open_mode=std::ios::in, bool trim_whitespaces=false) | BALL::LineBasedFile | |
MODE_APP | BALL::File | static |
MODE_ATE | BALL::File | static |
MODE_BINARY | BALL::File | static |
MODE_IN | BALL::File | static |
MODE_OUT | BALL::File | static |
MODE_TRUNC | BALL::File | static |
move(const String &source_name, const String &destination_name) | BALL::File | static |
moveTo(const String &destination_name) | BALL::File | |
name_ | BALL::File | protected |
open(const String &name, File::OpenMode open_mode=std::ios::in) | BALL::HMOFile | virtual |
open_mode_ | BALL::File | protected |
OpenMode typedef | BALL::File | |
operator!=(const LineBasedFile &f) | BALL::LineBasedFile | |
BALL::File::operator!=(const File &file) const | BALL::File | |
BALL::LineBasedFile::operator=(const LineBasedFile &file) | BALL::LineBasedFile | |
operator==(const HMOFile &file) | BALL::HMOFile | |
BALL::LineBasedFile::operator==(const LineBasedFile &f) | BALL::LineBasedFile | |
BALL::File::operator==(const File &file) const | BALL::File | |
original_name_ | BALL::File | protected |
P15 enum value | BALL::HMOFile | |
P6 enum value | BALL::HMOFile | |
parseColumnFormat(const char *format, Position index, Size length, void *arg) | BALL::LineBasedFile | |
Q4 enum value | BALL::HMOFile | |
Q8 enum value | BALL::HMOFile | |
read(Surface &surface) | BALL::HMOFile | virtual |
readChargeData_() | BALL::HMOFile | protected |
readElementData_(Surface &surface) | BALL::HMOFile | protected |
readLine() | BALL::LineBasedFile | |
readNodeData_(Surface &surface) | BALL::HMOFile | protected |
readUntil_(String const &pattern) | BALL::HMOFile | protected |
registerTransformation(const String &pattern, const String &exec) | BALL::File | static |
remove(String name) | BALL::File | static |
remove() | BALL::File | |
rename(String old_path, String new_path) | BALL::File | static |
renameTo(const String &new_path) | BALL::File | |
reopen() | BALL::File | |
reopen(File::OpenMode open_mode) | BALL::File | |
rewind() | BALL::LineBasedFile | |
search(const String &text, bool return_to_start=false) | BALL::LineBasedFile | |
search(const String &text, const String &stop, bool return_to_start=false) | BALL::LineBasedFile | |
setName(const String &name) | BALL::File | |
skipLines(Size number=1) | BALL::LineBasedFile | |
startsWith(const String &text) const | BALL::LineBasedFile | |
switchString(const std::vector< String > &data) const | BALL::LineBasedFile | |
T3 enum value | BALL::HMOFile | |
T6 enum value | BALL::HMOFile | |
test(const char *file, int line, bool condition, const String &msg) const | BALL::LineBasedFile | |
TH10 enum value | BALL::HMOFile | |
TH4 enum value | BALL::HMOFile | |
Transformation enum name | BALL::File | |
TRANSFORMATION__EXEC enum value | BALL::File | |
TRANSFORMATION__FILTER enum value | BALL::File | |
TRANSFORMATION__URL enum value | BALL::File | |
TRANSFORMATION_EXEC_PREFIX | BALL::File | static |
TRANSFORMATION_FILE_PREFIX | BALL::File | static |
TRANSFORMATION_FTP_PREFIX | BALL::File | static |
TRANSFORMATION_HTTP_PREFIX | BALL::File | static |
transformation_manager_ | BALL::File | protectedstatic |
transformation_methods_ | BALL::File | protectedstatic |
trim_whitespaces_ | BALL::LineBasedFile | protected |
trimWhiteSpacesEnabled() const | BALL::LineBasedFile | |
truncate(String path, Size size=0) | BALL::File | static |
truncate(Size size=0) | BALL::File | |
Type enum name | BALL::File | |
TYPE__BLOCK_SPECIAL_FILE enum value | BALL::File | |
TYPE__CHAR_SPECIAL_FILE enum value | BALL::File | |
TYPE__DIRECTORY enum value | BALL::File | |
TYPE__FIFO_SPECIAL_FILE enum value | BALL::File | |
TYPE__REGULAR_FILE enum value | BALL::File | |
TYPE__SOCKET enum value | BALL::File | |
TYPE__SYMBOLIC_LINK enum value | BALL::File | |
TYPE__UNKNOWN enum value | BALL::File | |
unregisterTransformation(const String &pattern) | BALL::File | static |
write(Surface const &surface) | BALL::HMOFile | virtual |
write(Surface const &surface, AtomContainer const &ac) | BALL::HMOFile | virtual |
writeCharges_(AtomContainer const &ac) | BALL::HMOFile | protected |
writeElements_(Surface const &surface) | BALL::HMOFile | protected |
writeNodes_(Surface const &surface) | BALL::HMOFile | protected |
~File() | BALL::File | virtual |
~HMOFile() | BALL::HMOFile | virtual |