BALL  1.4.79
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Properties Friends Macros Groups Pages
Class Index
A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Z
  A  
GridBasedScoring::Default (BALL)   KNNModel (BALL::QSAR)   ParamFile (BALL)   RunPythonThread (BALL::VIEW)   
HashGridBox3::DataIteratorTraits (BALL)   KPCRModel (BALL::QSAR)   ParsedFunction (BALL)   Stage::RaytracingMaterial (BALL::VIEW)   
AddHydrogenProcessor (BALL)   HBondProcessor::Default (BALL)   KPLSModel (BALL::QSAR)   PartialBondOrderAssignment (BALL)   ReadLockerType   
Addition (BALL)   HybridisationProcessor::Default (BALL)   
  L  
PartialChargeBase (BALL)   
  S  
AdvancedElectrostatic (BALL)   HydrogenBond::Default (BALL)   PartialChargeProcessor (BALL)   
AmberBend (BALL)   HydrogenBondSlick::Default (BALL)   LennardJones (BALL)   Path (BALL)   AmberTorsion::SingleAmberTorsion (BALL)   
AmberEvaluation (BALL)   IMGDock::Default (BALL)   Limits (BALL)   PB (BALL)   CharmmTorsion::SingleCharmmTorsion (BALL)   
AmberFF (BALL)   KGreedyBondOrderStrategy::Default (BALL)   Limits< bool > (BALL)   PBScoring (BALL)   CIFFile::SaveFrame (BALL)   
AmberNonBonded (BALL)   LennardJones::Data (BALL)   Limits< char > (BALL)   PCMCavFreeEnergyProcessor (BALL)   CIFFile::State (BALL)   
AmberStretch (BALL)   Lipophilic::Default (BALL)   Limits< double > (BALL)   RecordSLTBRG::PartnerAtom (BALL::PDB)   CosineTorsion::SingleData (BALL)   
AmberTorsion (BALL)   MMFF94::Default (BALL)   Limits< float > (BALL)   PDBAtom (BALL)   CosineTorsion::SingleValues (BALL)   
AmiraMeshFile (BALL)   MolecularDynamics::Default (BALL)   Limits< int > (BALL)   PDBAtomIteratorTraits (BALL)   DockResult::Scoring_ (BALL)   
AnisotropyShiftProcessor (BALL)   NonpolarSolvation::Default (BALL)   Limits< long > (BALL)   PDBFile (BALL)   EmpiricalHSShiftProcessor::ShiftHyperSurface_ (BALL)   
AntechamberFile (BALL)   NumericalSAS::Default (BALL)   Limits< short > (BALL)   PDBInfo (BALL)   SizeUnderflow (BALL::Exception)   
AromaticBondsPredicate (BALL)   Pair6_12InteractionEnergyProcessor::Default (BALL)   Limits< signed char > (BALL)   PDBRecords (BALL)   ExpressionParser::State (BALL)   
AromaticityProcessor (BALL)   Pair6_12RDFIntegrator::Default (BALL)   Limits< unsigned char > (BALL)   Peak (BALL)   ExpressionParser::SyntaxTree (BALL)   
AromaticRingStacking (BALL)   PairExpInteractionEnergyProcessor::Default (BALL)   Limits< unsigned int > (BALL)   PeakList (BALL)   FPTBondOrderStrategy::DPBackTracking_::StateComparator_ (BALL)   
AssignBaseProcessor (BALL)   PairExpRDFIntegrator::Default (BALL)   Limits< unsigned long > (BALL)   PeptideCapProcessor (BALL)   GAFFCESParser::State (BALL)   
AssignBondOrderProcessor (BALL)   PCMCavFreeEnergyProcessor::Default (BALL)   Limits< unsigned short > (BALL)   PeptideBuilder (BALL::Peptides)   GAMESSDatFile::State (BALL)   
AssignBondOrderProcessor::Algorithm (BALL)   PDBFile::Default (BALL)   LinearBaseFunction (BALL)   PeriodicBoundary (BALL)   GAMESSLogFile::State (BALL)   
AssignChargeProcessor (BALL)   NameConverter::Default (BALL::Peptides)   LineBasedFile (BALL)   PersistenceManager (BALL)   INIFile::Section (BALL)   
AssignRadiusProcessor (BALL)   PeriodicBoundary::Default (BALL)   LineSearch (BALL)   PersistentObject (BALL)   LogStreamBuf::StreamStruct (BALL)   
AssignTypeNameProcessor (BALL)   PierottiCavFreeEnergyProcessor::Default (BALL)   Lipophilic (BALL)   PharmacophoreConstraint (BALL)   MMFF94StretchBend::Stretch (BALL)   
AssignTypeProcessor (BALL)   PolarSolvation::Default (BALL)   List (BALL)   PiecewiseFunction (BALL)   MMFF94StretchBend::StretchBend (BALL)   
AStarBondOrderStrategy (BALL)   PoseClustering::Default (BALL)   LogP (BALL)   PiecewisePolynomial (BALL)   MOL2File::SetStruct (BALL)   
Atom (BALL)   Potential1210::Data (BALL)   LogStream (BALL)   PierottiCavFreeEnergyProcessor (BALL)   MOL2File::SubstructureStruct (BALL)   
AtomBijection (BALL)   QuadraticAngleBend::Data (BALL)   LogStreamBuf (BALL)   PLP (BALL)   NMRStarFile::Sample (BALL)   
AtomContainer (BALL)   QuadraticBondStretch::Data (BALL)   LogStreamBuf::LoglineStruct (BALL)   PLPScoring (BALL)   NMRStarFile::SampleCondition (BALL)   
AtomContainerIteratorTraits (BALL)   QuadraticImproperTorsion::Data (BALL)   LogStreamNotifier (BALL)   PluginHandler (BALL)   NMRStarFile::ShiftReferenceElement (BALL)   
AtomicPolarizabilities (BALL)   ReissCavFreeEnergyProcessor::Default (BALL)   LongDoubleTraits (BALL)   PluginManager (BALL)   NMRStarFile::ShiftReferenceSet (BALL)   
AtomInformationContent (BALL)   ResidueTorsions::Data (BALL)   RecordLINK::LinkPartner (BALL::PDB)   Polarity (BALL)   Structure (BALL::PDB)   
AtomIteratorTraits (BALL)   RingPerceptionProcessor::Default (BALL)   LatentVariableModel (BALL::QSAR)   PolarSolvation (BALL)   PTE_::SymbolToElement (BALL)   
AtomNamePredicate (BALL)   ScoringFunction::Default (BALL)   LDAModel (BALL::QSAR)   PolarVdWSurface (BALL)   SingularMatrixError (BALL::QSAR::Exception)   
AtomTypePredicate (BALL)   SDGenerator::Default (BALL)   LibsvmModel (BALL::QSAR)   PoseClustering (BALL)   SNBModel (BALL::QSAR)   
AtomTyper (BALL)   ShiftedLVMMMinimizer::Default (BALL)   LinearModel (BALL::QSAR)   PoseClustering::PosePointer (BALL)   Statistics (BALL::QSAR)   
AtomTypes (BALL)   SideChainPlacementProcessor::Default (BALL)   LogitModel (BALL::QSAR)   PositivePolarVdWSurface (BALL)   SVMModel (BALL::QSAR)   
AtomVector (BALL)   DLArrayHelper (BALL::SimpleDownloaderHelper)   Label (BALL::VIEW)   PositiveVdWSurface (BALL)   SVRModel (BALL::QSAR)   
AutoDeletable (BALL)   DLHelper (BALL::SimpleDownloaderHelper)   LabelDialog (BALL::VIEW)   Potential1210 (BALL)   SASEdge (BALL)   
AxialPredicate (BALL)   DLThread (BALL::SimpleDownloaderHelper)   LabelModel (BALL::VIEW)   PreciseTime (BALL)   SASFace (BALL)   
CanonicalMD::AuxFactors (BALL)   SLICKEnergy::Default (BALL)   LightSettings (BALL::VIEW)   PreferencesObject (BALL)   SASTriangulator (BALL)   
CHPI::AromaticRing (BALL)   SLICKScore::Default (BALL)   LightSource (BALL::VIEW)   PrincipalMomentOfInertia (BALL)   SASVertex (BALL)   
CHPISlick::AromaticRing (BALL)   SnapShotManager::Default (BALL)   Line (BALL::VIEW)   PrincipalMomentOfInertiaX (BALL)   ScoreGridSet (BALL)   
Composite::AncestorIteratorTraits (BALL)   StrangLBFGSMinimizer::Default (BALL)   LogEvent (BALL::VIEW)   PrincipalMomentOfInertiaY (BALL)   ScoringBaseFunction (BALL)   
FPTBondOrderStrategy::AdditionalBagProperties_ (BALL)   UhligCavFreeEnergyProcessor::Default (BALL)   LogView (BALL::VIEW)   PrincipalMomentOfInertiaZ (BALL)   ScoringComponent (BALL)   
FPTBondOrderStrategy::Assignment_ (BALL)   VanDerWaalsSlick::Default (BALL)   TextEditorWidget::LineNumbers (BALL::VIEW)   Processor (BALL)   ScoringFunction (BALL)   
GAFFCESParser::APSMatcher (BALL)   Dataset (BALL::VIEW)   
  M  
Product (BALL)   ScoringOptimizer (BALL)   
GAFFCESParser::APSMatcher::APSTerm (BALL)   DatasetControl (BALL::VIEW)   PropertyManager (BALL)   SCWRLRotamerFile (BALL)   
HybridisationProcessor::AtomNames_ (BALL)   DatasetController (BALL::VIEW)   HybridisationProcessor::Method (BALL)   Protein (BALL)   SDFile (BALL)   
MicroCanonicalMD::AuxFactors (BALL)   DatasetMessage (BALL::VIEW)   Mainframe (BALL)   ProteinIteratorTraits (BALL)   SDGenerator (BALL)   
MMFF94AtomTyper::AromaticType (BALL)   DemoTutorialDialog (BALL::VIEW)   MeanAtomInformationContent (BALL)   ProteinPredicate (BALL)   SecondaryStructure (BALL)   
MOL2File::AtomStruct (BALL)   DeselectControlsMessage (BALL::VIEW)   MicroCanonicalMD (BALL)   PTE_ (BALL)   SecondaryStructureIteratorTraits (BALL)   
MOLFile::AtomStruct (BALL)   DeviceEvent (BALL::VIEW)   MMFF94 (BALL)   PubChemDownloader (BALL)   SecondaryStructurePredicate (BALL)   
AdditionalAtomInfo (BALL::PDB)   Disc (BALL::VIEW)   MMFF94AtomType (BALL)   PyColorRGBAVector (BALL)   SecondaryStructureProcessor (BALL)   
Structure::AtomEntry (BALL::PDB)   DisplayProperties (BALL::VIEW)   MMFF94AtomTypeEquivalences (BALL)   PyCompositeList (BALL)   Selectable (BALL)   
AminoAcidDescriptor (BALL::Peptides)   DockableRegularData1DWidget (BALL::VIEW)   MMFF94AtomTyper (BALL)   PyDatasetVector (BALL)   SelectedPredicate (BALL)   
ALLModel (BALL::QSAR)   DockableRegularData2DWidget (BALL::VIEW)   MMFF94AtomTypes (BALL)   PyIndexList (BALL)   Selector (BALL)   
AutomaticModelCreator (BALL::QSAR)   DockDialog (BALL::VIEW)   MMFF94BendParameters (BALL)   PyInterpreter (BALL)   SESComputer (BALL)   
SDGenerator::AtomComparator (BALL)   DockingController (BALL::VIEW)   MMFF94ChargeProcessor (BALL)   PropertyError (BALL::QSAR::Exception)   SESEdge (BALL)   
AddBackboneModel (BALL::VIEW)   DockingFinishedMessage (BALL::VIEW)   MMFF94ESParameters (BALL)   PCRModel (BALL::QSAR)   SESFace (BALL)   
AddBallAndStickModel (BALL::VIEW)   DockingThread (BALL::VIEW)   MMFF94NonBonded (BALL)   PLSModel (BALL::QSAR)   SESSingularityCleaner (BALL)   
AddCartoonModel (BALL::VIEW)   DockProgressDialog (BALL::VIEW)   MMFF94OutOfPlaneBend (BALL)   PredictionConfiguration (BALL::QSAR)   SESTriangulator (BALL)   
AddLineModel (BALL::VIEW)   DockResultController (BALL::VIEW)   MMFF94ParametersBase (BALL)   RingPerceptionProcessor::PathMessage_ (BALL)   SESVertex (BALL)   
AddSurfaceModel (BALL::VIEW)   DockResultDialog (BALL::VIEW)   MMFF94PlaneParameters (BALL)   RSComputer::ProbePosition (BALL)   ShiftedLVMMMinimizer (BALL)   
AddVanDerWaalsModel (BALL::VIEW)   DockWidget (BALL::VIEW)   MMFF94StretchBend (BALL)   SESSingularityCleaner::ProbeIntersection (BALL)   ShiftModel (BALL)   
AmberConfigurationDialog (BALL::VIEW)   DoubleEditorWidget (BALL::VIEW)   MMFF94StretchBendParameters (BALL)   SmartsParser::SPAtom::Property (BALL)   ShiftModel1D (BALL)   
AnimationThread (BALL::VIEW)   DownloadElectronDensity (BALL::VIEW)   MMFF94StretchParameters (BALL)   SmartsParser::SPAtom::PropertyValue (BALL)   ShiftModel2D (BALL)   
AssignBondOrderConfigurationDialog (BALL::VIEW)   DownloadPDBFile (BALL::VIEW)   MMFF94Torsion (BALL)   CanvasWidget::PixmapItem (BALL::VIEW)   ShiftModule (BALL)   
AssignBondOrderResultsDialog (BALL::VIEW)   DragLogView (BALL::VIEW)   MMFF94TorsionParameters (BALL)   ParsedFunctionDialog (BALL::VIEW)   SideChainOptimizer (BALL)   
AtomBondModelBaseProcessor (BALL::VIEW)   GLDisplayList::DisplayListRedeclaration (BALL::VIEW)   MMFF94VDWParameters (BALL)   PDBInfoEditorWidget (BALL::VIEW)   SideChainPlacementProcessor (BALL)   
AtomChargeColorProcessor (BALL::VIEW)   SDWidget::Default (BALL::VIEW)   MMScoring (BALL)   PeptideDialog (BALL::VIEW)   SimpleBase (BALL)   
AtomDistanceColorProcessor (BALL::VIEW)   
  E  
MOL2File (BALL)   PickingMode (BALL::VIEW)   SimpleDownloader (BALL)   
AtomOverview (BALL::VIEW)   MOL2File::MoleculeStruct (BALL)   PixelFormat (BALL::VIEW)   SimpleExperiment1D (BALL)   
AtomOverview::ApplyProcessor (BALL::VIEW)   EdgeItem (BALL)   MolDB (BALL)   PluginDialog (BALL::VIEW)   SingleBondsPredicate (BALL)   
  B  
EFShiftProcessor (BALL)   MolecularDynamics (BALL)   PluginDirectoryModel (BALL::VIEW)   SizeOfSSSR (BALL)   
Electrostatic (BALL)   MolecularGraph (BALL)   PluginModel (BALL::VIEW)   SLICKEnergy (BALL)   
Atom::BondIteratorTraits (BALL)   ElectrostaticPotentialCalculator (BALL)   MolecularInformation (BALL)   Point (BALL::VIEW)   SLICKScore (BALL)   
BackBonePredicate (BALL)   Element (BALL)   MolecularInteractions (BALL)   PositionColorProcessor (BALL::VIEW)   SmartsMatcher (BALL)   
BalabanIndexJ (BALL)   ElementPredicate (BALL)   MolecularSimilarity (BALL)   POVRenderer (BALL::VIEW)   SmartsParser (BALL)   
BALLPlugin (BALL)   Embeddable (BALL)   MolecularWeight (BALL)   POVRenderer::POVRendererClippingPlane (BALL::VIEW)   SmartsParser::SPAtom (BALL)   
BaseIterator (BALL)   EmpiricalHSShiftProcessor (BALL)   Molecule (BALL)   Preferences (BALL::VIEW)   SmartsParser::SPBond (BALL)   
BendComponent (BALL)   EnergeticEvaluation (BALL)   MoleculeIteratorTraits (BALL)   PreferencesEntry (BALL::VIEW)   SmartsParser::SPEdge (BALL)   
BidirectionalIterator (BALL)   EnergyMinimizer (BALL)   MoleculeObjectCreator (BALL)   PropDeleteWidget (BALL::VIEW)   SmartsParser::SPNode (BALL)   
BinaryFileAdaptor (BALL)   EnergyProcessor (BALL)   MoleculePredicate (BALL)   PropEditorWidget (BALL::VIEW)   SmartsParser::State (BALL)   
BinaryFingerprintMethods (BALL)   Enumerator (BALL)   MOLFile (BALL)   PropertyEditor (BALL::VIEW)   SMARTSPredicate (BALL)   
BinaryFunctor (BALL)   EnumeratorIndex (BALL)   MolFileFactory (BALL)   PTEDialog (BALL::VIEW)   SmilesParser (BALL)   
BinaryPredicate (BALL)   EvolutionaryDocking (BALL)   MOPACInputFile (BALL)   PubChemDialog (BALL::VIEW)   SmilesParser::SPAtom (BALL)   
BinaryProcessor (BALL)   Experiment (BALL)   MOPACOutputFile (BALL)   PubChemDialog::ParsedResult_ (BALL::VIEW)   SmilesParser::SPBond (BALL)   
BindingPocketProcessor (BALL)   Expression (BALL)   MPISupport (BALL)   PythonHighlighter (BALL::VIEW)   SmilesParser::State (BALL)   
Bit (BALL)   ExpressionParser (BALL)   MutableConstant (BALL)   PythonSettings (BALL::VIEW)   SnapShot (BALL)   
BitVector (BALL)   ExpressionPredicate (BALL)   MutablePower (BALL)   PythonValidator (BALL::VIEW)   SnapShotManager (BALL)   
Bond (BALL)   ExpressionTree (BALL)   Mutator (BALL)   PyWidget (BALL::VIEW)   Solvation (BALL)   
BondOrderAssignment (BALL)   FPTBondOrderStrategy::EdgeComparator_ (BALL)   NMRStarFile::MolecularSystem (BALL)   
  Q  
SolventAccessibleSurface (BALL)   
BondOrderAssignmentStrategy (BALL)   EditableEdgeCopier (BALL::GRAPH)   NMRStarFile::MonomericPolymer (BALL)   SolventAtomDescriptor (BALL)   
BondPolarizabilities (BALL)   EditableVertexCopier (BALL::GRAPH)   ModelParameterError (BALL::QSAR::Exception)   QSARData (BALL::QSAR)   SolventDescriptor (BALL)   
BoundingBoxProcessor (BALL)   HybridisationProcessor::Elements_ (BALL)   MLRModel (BALL::QSAR)   QuadraticAngleBend (BALL)   SolventExcludedSurface (BALL)   
BranchAndBoundBondOrderStrategy (BALL)   MMFF94StretchParameters::EmpiricalBondData (BALL)   Model (BALL::QSAR)   QuadraticBondStretch (BALL)   SolventParameter (BALL)   
Bruker1DFile (BALL)   NMRStarFile::EntryInformation (BALL)   ModelConfiguration (BALL::QSAR)   QuadraticImproperTorsion (BALL)   SolventPredicate (BALL)   
Bruker2DFile (BALL)   RecordDBREF::EndingDatabaseSegment (BALL::PDB)   ModelFactory (BALL::QSAR)   Quadruple (BALL)   SortedPosition2 (BALL)   
BuildBondsProcessor (BALL)   RecordDBREF::EndingSequence (BALL::PDB)   SideChainPlacementProcessor::Method (BALL)   QuaternionGene (BALL)   SortedPosition3 (BALL)   
BurialDepth (BALL)   EditFunctions (BALL::VIEW)   TreeWidthImplementation::MinorMinWidthCriterion (BALL)   QuaternionParameter (BALL)   Sp2HybridizedPredicate (BALL)   
BuriedPolar (BALL)   EditMode (BALL::VIEW)   TreeWidthImplementation::MinorMinWidthReducer (BALL)   QFtpHackHelper (BALL::SimpleDownloaderHelper)   Sp3HybridizedPredicate (BALL)   
BufferOverflow (BALL::Exception)   EditOperation (BALL::VIEW)   AddBackboneModel::ModelPart (BALL::VIEW)   QFtpHackThread (BALL::SimpleDownloaderHelper)   SpaceGroupParameters (BALL)   
FDPB::Boundary (BALL)   EditOperationDialog (BALL::VIEW)   MainControl (BALL::VIEW)   TreeWidthImplementation::QuickBB (BALL)   Spectrum (BALL)   
FPTBondOrderStrategy::BackTrackingState_ (BALL)   EditSettings (BALL::VIEW)   MainControlPreferences (BALL::VIEW)   TreeWidthImplementation::QuickBB::QuickBBState (BALL)   SpHybridizedPredicate (BALL)   
FragmentDB::BuildBondsProcessor (BALL)   EditSingleShortcut (BALL::VIEW)   MaterialSettings (BALL::VIEW)   QuadMesh (BALL::VIEW)   SquareFunction (BALL)   
HashGrid3::BoxIteratorTraits (BALL)   ElementColorProcessor (BALL::VIEW)   MDSimulationThread (BALL::VIEW)   QuadMesh::Quadruple (BALL::VIEW)   StaticLigandFragment (BALL)   
HashGridBox3::BoxIteratorTraits (BALL)   EnergyMinimizerThread (BALL::VIEW)   Mesh (BALL::VIEW)   QAbstractListModel   SteepestDescentMinimizer (BALL)   
MMFF94StretchBend::Bend (BALL)   ExportGeometryDialog (BALL::VIEW)   MeshBuffer (BALL::VIEW)   QAbstractTableModel   StrangLBFGSMinimizer (BALL)   
MMFF94StretchParameters::BondData (BALL)   PreferencesEntry::ExtendedPreferencesObject (BALL::VIEW)   Message (BALL::VIEW)   QCanvasRectangle   StretchComponent (BALL)   
MOL2File::BondStruct (BALL)   
  F  
MessageEvent (BALL::VIEW)   QCanvasView   String (BALL)   
MOLFile::BondStruct (BALL)   MinimizationDialog (BALL::VIEW)   QDialog   StringHashMap (BALL)   
NMRStarFile::BALLToBMRBMapper (BALL)   FileNotFound (BALL::Exception)   MMFF94ConfigurationDialog (BALL::VIEW)   QDockWidget   StructureMapper (BALL)   
BookKeeping (BALL::PDB)   FormatUnsupported (BALL::Exception)   ModelInformation (BALL::VIEW)   QEvent   StructurePreparer (BALL)   
BayesModel (BALL::QSAR)   Factory (BALL)   ModelProcessor (BALL::VIEW)   QGLWidget   Substring (BALL)   
BasicHelper (BALL::SimpleDownloaderHelper)   FalsePredicate (BALL)   ModelSettingsDialog (BALL::VIEW)   QItemDelegate   Subtraction (BALL)   
TreeWidth::BagContentWriter (BALL)   FDPB (BALL)   ModifyRepresentationDialog (BALL::VIEW)   QLineEdit   SurfaceBase (BALL)   
TRegularData1D::BlockValueType (BALL)   FDPB::FastAtomStruct (BALL)   ModularWidget (BALL::VIEW)   QMainWindow   SurfaceProcessor (BALL)   
TRegularData2D::BlockValueType (BALL)   FermiBaseFunction (BALL)   ModularWidgetPlugin (BALL::VIEW)   QMouseEvent   System (BALL)   
TRegularData3D::BlockValueType (BALL)   File (BALL)   ModularWidgetPluginHandler (BALL::VIEW)   QObject   Scene (BALL::VIEW)   
BALLThread (BALL::VIEW)   FileSystem (BALL)   MolecularControl (BALL::VIEW)   QPaintDevice   SceneMessage (BALL::VIEW)   
BondProperties (BALL::VIEW)   FlexDefinition (BALL)   MolecularDynamicsDialog (BALL::VIEW)   QPlainTextEdit   SDWidget (BALL::VIEW)   
BoolEditorWidget (BALL::VIEW)   FlexibleMolecule (BALL)   MolecularFileDialog (BALL::VIEW)   QPushButton   SecondaryStructureColorProcessor (BALL::VIEW)   
Box (BALL::VIEW)   FloatTraits (BALL)   MolecularStructure (BALL::VIEW)   QSyntaxHighlighter   ServerPreferences (BALL::VIEW)   
BufferedRenderer (BALL::VIEW)   ForceField (BALL)   MolecularTaskMessage (BALL::VIEW)   QTableView   ServerWidget (BALL::VIEW)   
ButtonEvent (BALL::VIEW)   ForceFieldComponent (BALL)   MoleculeColorProcessor (BALL::VIEW)   QTableWidget   SetCamera (BALL::VIEW)   
ServerWidget::BALLViewServer (BALL::VIEW)   ForceFieldEvaluation (BALL)   MotionTrackingEvent (BALL::VIEW)   QTextBrowser   SetClippingPlane (BALL::VIEW)   
  C  
ForceFieldParameters (BALL)   MoveMode (BALL::VIEW)   QThread   ShortcutDialog (BALL::VIEW)   
FormalCharge (BALL)   MultiColorExtension (BALL::VIEW)   QTreeWidget   ShortcutRegistry (BALL::VIEW)   
CanonicalMD (BALL)   ForwardIterator (BALL)   MultiLine (BALL::VIEW)   QTreeWidgetItem   ShortcutTableModel (BALL::VIEW)   
CCP4File (BALL)   FPTBondOrderStrategy (BALL)   MyTextBrowser (BALL::VIEW)   QValidator   ShortcutTableView (BALL::VIEW)   
Chain (BALL)   FPTBondOrderStrategy::FPTBondOrderAssignment_ (BALL)   Stage::Material (BALL::VIEW)   QWebView   ShowDisplayPropertiesMessage (BALL::VIEW)   
ChainIteratorTraits (BALL)   Fragment (BALL)   MolecularGraphBase   QWidget   ShowHelpMessage (BALL::VIEW)   
ChainPredicate (BALL)   FragmentationalSolvation (BALL)   MutexLockerType   
  R  
SimpleBox (BALL::VIEW)   
ChargePredicate (BALL)   FragmentDB (BALL)   
  N  
SimulationThread (BALL::VIEW)   
ChargeRuleProcessor (BALL)   FragmentDistanceCollector (BALL)   GeometricFit::RotationAngles_ (BALL)   SnapshotManagerInterface (BALL::VIEW)   
CharmmBend (BALL)   FragmentIteratorTraits (BALL)   Bond::NotBound (BALL)   HBondProcessor::ResidueData (BALL)   SnapshotVisualisationDialog (BALL::VIEW)   
CharmmEEF1 (BALL)   FresnoTypes (BALL)   Client::NoPersistentObject (BALL)   JohnsonBoveyShiftProcessor::Ring (BALL)   Sphere (BALL::VIEW)   
CharmmFF (BALL)   FeatureSelectionParameterError (BALL::QSAR::Exception)   NoBufferAvailable (BALL::Exception)   NMRStarFile::MolecularSystem::RelatedDB (BALL)   Stage (BALL::VIEW)   
CharmmImproperTorsion (BALL)   FeatureSelection (BALL::QSAR)   NotImplemented (BALL::Exception)   RecordANISOU (BALL::PDB)   StageSettings (BALL::VIEW)   
CharmmNonBonded (BALL)   FeatureSelectionConfiguration (BALL::QSAR)   NotInitialized (BALL::Exception)   RecordATOM (BALL::PDB)   StereoSettingsDialog (BALL::VIEW)   
CharmmStretch (BALL)   TreeWidthImplementation::FillInHeuristic (BALL)   NullPointer (BALL::Exception)   RecordAUTHOR (BALL::PDB)   STLRenderer (BALL::VIEW)   
CharmmTorsion (BALL)   TriangulatedSphere::Face (BALL)   FragmentDB::NoFragmentNode (BALL)   RecordCAVEAT (BALL::PDB)   StringEditorWidget (BALL::VIEW)   
CHPI (BALL)   FakeDriver (BALL::VIEW)   FragmentDB::NormalizeNamesProcessor (BALL)   RecordCISPEP (BALL::PDB)   SyncClippingPlanesMessage (BALL::VIEW)   
CHPI::CHGroup (BALL)   FDPBDialog (BALL::VIEW)   HashSet::Node (BALL)   RecordCOMPND (BALL::PDB)   
  T  
CHPISlick (BALL)   FieldLineCreator (BALL::VIEW)   MMFF94NonBonded::NonBondedPairData (BALL)   RecordCON06 (BALL::PDB)   
CHPISlick::CHGroup (BALL)   FieldLinesDialog (BALL::VIEW)   NamedProperty (BALL)   RecordCON061 (BALL::PDB)   TooManyBonds (BALL::Exception)   
CIFFile (BALL)   FileObserver (BALL::VIEW)   NegativePolarVdWSurface (BALL)   RecordCON062 (BALL::PDB)   TooManyErrors (BALL::Exception)   
ClaverieParameter (BALL)   FinishedSimulationMessage (BALL::VIEW)   NegativeVdWSurface (BALL)   RecordCON063 (BALL::PDB)   GAFFCESParser::TruePredicate (BALL)   
ClearChargeProcessor (BALL)   FloatEditorWidget (BALL::VIEW)   NMRStarFile (BALL)   RecordCON064 (BALL::PDB)   GAFFTypeProcessor::TypeDefinition (BALL)   
ClearRadiusProcessor (BALL)   ForceColorProcessor (BALL::VIEW)   NMRStarFile::NMRAtomData (BALL)   RecordCONECT (BALL::PDB)   MMFF94Torsion::Torsion (BALL)   
ClearShiftProcessor (BALL)   ForceModel (BALL::VIEW)   NMRStarFile::NMRAtomDataSet (BALL)   RecordCRYST1 (BALL::PDB)   TooManyPLSComponents (BALL::QSAR::Exception)   
Client (BALL)   FrameBuffer (BALL::VIEW)   NMRStarFile::NMRSpectrometer (BALL)   RecordDBREF (BALL::PDB)   RingPerceptionProcessor::TNode_ (BALL)   
CommandlineParser (BALL)   FrameBufferFormat (BALL::VIEW)   NodeItem (BALL)   RecordEND (BALL::PDB)   RMSDMinimizer::TooFewCoordinates (BALL)   
Comparator (BALL)   
  G  
NonpolarSolvation (BALL)   RecordENDMDL (BALL::PDB)   TAngle (BALL)   
ComposedEnergyProcessor (BALL)   NucleicAcid (BALL)   RecordEXPDTA (BALL::PDB)   TBox3 (BALL)   
Composite (BALL)   GeneralException (BALL::Exception)   NucleicAcidIteratorTraits (BALL)   RecordFORMUL (BALL::PDB)   TCircle3 (BALL)   
Composite::ChildCompositeIteratorTraits (BALL)   GlobalExceptionHandler (BALL::Exception)   NucleicAcidPredicate (BALL)   RecordFTNOTE (BALL::PDB)   TContour (BALL)   
Composite::CompositeIteratorTraits (BALL)   GAFFCESParser (BALL)   Nucleotide (BALL)   RecordHEADER (BALL::PDB)   TContourLine (BALL)   
CompositeIteratorTraits (BALL)   GAFFTypeProcessor (BALL)   NucleotideIteratorTraits (BALL)   RecordHELIX (BALL::PDB)   TContourSurface (BALL)   
Conformation (BALL)   GAMESSDatFile (BALL)   NucleotideMapping (BALL)   RecordHET (BALL::PDB)   TCPIOStream (BALL)   
Conformation4C1Predicate (BALL)   GAMESSLogFile (BALL)   NucleotidePredicate (BALL)   RecordHETATM (BALL::PDB)   TCPServer (BALL)   
ConformationSet (BALL)   GeneralizedBornModel (BALL)   NumberOfAromaticAtoms (BALL)   RecordHETNAM (BALL::PDB)   TCPServerThread (BALL)   
ConjugateGradientMinimizer (BALL)   GenericGene (BALL)   NumberOfAromaticBonds (BALL)   RecordHETSYN (BALL::PDB)   Templates (BALL)   
ConnectedComponentsProcessor (BALL)   GenericMolFile (BALL)   NumberOfAtoms (BALL)   RecordHYDBND (BALL::PDB)   TextPersistenceManager (BALL)   
ConnectedToPredicate (BALL)   GenericParameter (BALL)   NumberOfBonds (BALL)   RecordJRNL (BALL::PDB)   TFFT1D (BALL)   
ConnectedToPredicate::CTPNode (BALL)   GeneticAlgorithm (BALL)   NumberOfBondsPredicate (BALL)   RecordKEYWDS (BALL::PDB)   TFFT2D (BALL)   
ConnectivityBase (BALL)   GeneticIndividual (BALL)   NumberOfBoron (BALL)   RecordLINK (BALL::PDB)   TFFT3D (BALL)   
Constant (BALL)   GeometricCenterProcessor (BALL)   NumberOfBromine (BALL)   RecordMASTER (BALL::PDB)   Timer (BALL)   
ConstantFunction (BALL)   GeometricFit (BALL)   NumberOfCarbon (BALL)   RecordMODEL (BALL::PDB)   TimeStamp (BALL)   
ConstBidirectionalIterator (BALL)   GlobalInitializer (BALL)   NumberOfChlorine (BALL)   RecordMODRES (BALL::PDB)   TLine3 (BALL)   
ConstBinaryProcessor (BALL)   Gradient (BALL)   NumberOfDoubleBonds (BALL)   RecordMTRIX1 (BALL::PDB)   TMatrix4x4 (BALL)   
ConstForwardIterator (BALL)   GraphTraits (BALL::GRAPH)   NumberOfFlourine (BALL)   RecordMTRIX2 (BALL::PDB)   TMutex (BALL)   
Constraint (BALL)   GraphEdge (BALL)   NumberOfHeavyAtoms (BALL)   RecordMTRIX3 (BALL::PDB)   TMutex< QMutex > (BALL)   
ConstRandomAccessIterator (BALL)   GraphFace (BALL)   NumberOfHeavyBonds (BALL)   RecordOBSLTE (BALL::PDB)   TMutexLocker (BALL)   
ConstUnaryProcessor (BALL)   GraphTriangle (BALL)   NumberOfHydrogen (BALL)   RecordORIGX1 (BALL::PDB)   TotalNegativePartialCharge (BALL)   
CosineTorsion (BALL)   GraphVertex (BALL)   NumberOfHydrogenBondAcceptors (BALL)   RecordORIGX2 (BALL::PDB)   TotalPositivePartialCharge (BALL)   
CreateSpectrumProcessor (BALL)   GridAnalysis (BALL)   NumberOfHydrogenBondDonors (BALL)   RecordORIGX3 (BALL::PDB)   TPlane3 (BALL)   
CrystalGenerator (BALL)   GridBasedScoring (BALL)   NumberOfHydrophobicAtoms (BALL)   RecordREMARK (BALL::PDB)   TQuaternion (BALL)   
CrystalInfo (BALL)   GridBasedScoring::GridSetsResult (BALL)   NumberOfIodine (BALL)   RecordREVDAT (BALL::PDB)   TrajectoryFile (BALL)   
CubicFunction (BALL)   GridedMM (BALL)   NumberOfNitrogen (BALL)   RecordSCALE1 (BALL::PDB)   TrajectoryFileFactory (BALL)   
CubicSpline1D (BALL)   GridedPLP (BALL)   NumberOfOxygen (BALL)   RecordSCALE2 (BALL::PDB)   TransformationManager (BALL)   
CubicSpline2D (BALL)   GPModel (BALL::QSAR)   NumberOfPhosphorus (BALL)   RecordSCALE3 (BALL::PDB)   TransformationProcessor (BALL)   
DockResult::Compare_ (BALL)   TreeWidthImplementation::GeneralLowerBoundAlgorithm (BALL)   NumberOfRotatableBonds (BALL)   RecordSEQADV (BALL::PDB)   TranslationProcessor (BALL)   
CUDAError (BALL::Exception)   TreeWidthImplementation::GreedyX (BALL)   NumberOfRotatableSingleBonds (BALL)   RecordSEQRES (BALL::PDB)   TReadLocker (BALL)   
FDPB::ChargeDistribution (BALL)   GenerateCrystalDialog (BALL::VIEW)   NumberOfSingleBonds (BALL)   RecordSHEET (BALL::PDB)   TReadWriteLock (BALL)   
File::CannotWrite (BALL)   GenerateCrystalThread (BALL::VIEW)   NumberOfSulfur (BALL)   RecordSIGATM (BALL::PDB)   TReadWriteLock< QReadWriteLock > (BALL)   
FPTBondOrderStrategy::ComputingData_ (BALL)   GenericControl (BALL::VIEW)   NumberOfTripleBonds (BALL)   RecordSIGUIJ (BALL::PDB)   TreeWidth (BALL)   
FragmentDB::BuildBondsProcessor::Connection (BALL)   GenericSelectionMessage (BALL::VIEW)   NumericalIntegrator (BALL)   RecordSITE (BALL::PDB)   TreeWidthImplementation (BALL)   
GAFFCESParser::CESelementConnectionPredicate (BALL)   GeometricControl (BALL::VIEW)   NumericalSAS (BALL)   RecordSLTBRG (BALL::PDB)   TreeWidthImplementation::TreeDecompositionBuilder (BALL)   
GAFFCESParser::CESelementPredicate (BALL)   GeometricFitDialog (BALL::VIEW)   Structure::NCSMatrix (BALL::PDB)   RecordSOURCE (BALL::PDB)   TRegularData1D (BALL)   
GAFFCESParser::CESPredicate (BALL)   GeometricObject (BALL::VIEW)   NameConverter (BALL::Peptides)   RecordSPRSDE (BALL::PDB)   TRegularData2D (BALL)   
GAFFCESParser::CESwildcardsConnectionPredicate (BALL)   GeometricObjectSelectionMessage (BALL::VIEW)   PLP::NonBondedPairData (BALL)   RecordSSBOND (BALL::PDB)   TRegularData3D (BALL)   
GAFFCESParser::CESwildcardsPredicate (BALL)   GLDisplayList (BALL::VIEW)   NoPCAVariance (BALL::QSAR::Exception)   RecordTER (BALL::PDB)   Triangle (BALL)   
MOL2File::CommentStruct (BALL)   GLOffscreenTarget (BALL::VIEW)   NBModel (BALL::QSAR)   RecordTITLE (BALL::PDB)   TriangleEdge (BALL)   
MOLFile::CountsStruct (BALL)   GLRenderer (BALL::VIEW)   NonLinearModel (BALL::QSAR)   RecordTURN (BALL::PDB)   TrianglePoint (BALL)   
NMRStarFile::MolecularSystem::ChemicalUnit (BALL)   GLRenderWindow (BALL::VIEW)   ColorUnit::NotInHexFormat (BALL::VIEW)   RecordTVECT (BALL::PDB)   TriangulatedSAS (BALL)   
NMRStarFile::Sample::Component (BALL)   GridColorWidget (BALL::VIEW)   GLDisplayList::NestedDisplayList (BALL::VIEW)   RecordTypeFormat (BALL::PDB)   TriangulatedSES (BALL)   
Structure::ConectAtomList (BALL::PDB)   GridVisualisation (BALL::VIEW)   GLDisplayList::NoDisplayListAvailable (BALL::VIEW)   RecordUNKNOWN (BALL::PDB)   TriangulatedSphere (BALL)   
PoseClustering::ClusterProperties (BALL)   GridVisualizationDialog (BALL::VIEW)   NetworkPreferences (BALL::VIEW)   Residue (BALL::PDB)   TriangulatedSurface (BALL)   
PoseClustering::ClusterTreeNodeComparator (BALL)   
  H  
NewSelectionMessage (BALL::VIEW)   PoseClustering::RigidTransformation (BALL)   Triple (BALL)   
PoseClustering::ClusterTreeWriter_ (BALL)   NotificationEvent (BALL::VIEW)   Registry (BALL::QSAR)   TripleBondsPredicate (BALL)   
ClassificationModel (BALL::QSAR)   AStarBondOrderStrategy::Heuristic (BALL)   ServerWidget::NotCompositeObject (BALL::VIEW)   RegistryEntry (BALL::QSAR)   TRRFile (BALL)   
ClassificationValidation (BALL::QSAR)   HaighMallionShiftProcessor (BALL)   
  O  
RegressionModel (BALL::QSAR)   TRRFile::TRRHeader (BALL)   
ConfigIO (BALL::QSAR)   HashGrid3 (BALL)   RegressionValidation (BALL::QSAR)   TruePredicate (BALL)   
ConfigurationReadingError (BALL::QSAR::Exception)   HashGridBox3 (BALL)   AmberFF::Option (BALL)   RRModel (BALL::QSAR)   TSimpleBox3 (BALL)   
StaticLigandFragment::Connection (BALL)   HashMap (BALL)   AromaticityProcessor::Option (BALL)   RadialDistributionFunction (BALL)   TSimpleMolecularGraph (BALL)   
TContourSurface::Cube (BALL)   HashSet (BALL)   AromaticRingStacking::Option (BALL)   RadiusRuleProcessor (BALL)   TSphere3 (BALL)   
TreeWidth::ComponentFilter_ (BALL)   HBondProcessor (BALL)   AssignBondOrderProcessor::Option (BALL)   RandomAccessIterator (BALL)   TSurface (BALL)   
CalculateFDPBThread (BALL::VIEW)   HBondProcessor::HBond (BALL)   AStarBondOrderStrategy::Option (BALL)   RandomCoilShiftProcessor (BALL)   TSurface::Triangle (BALL)   
Camera (BALL::VIEW)   HBondShiftProcessor (BALL)   BinaryFingerprintMethods::Option (BALL)   RandomEvaluation (BALL)   TVector2 (BALL)   
CanvasWidget (BALL::VIEW)   HINFile (BALL)   BindingPocketProcessor::Option (BALL)   RandomNumberGenerator (BALL)   TVector3 (BALL)   
ChainColorProcessor (BALL::VIEW)   HMOFile (BALL)   BranchAndBoundBondOrderStrategy::Option (BALL)   RDFIntegrator (BALL)   TVector4 (BALL)   
ChannelFormat (BALL::VIEW)   HMOFile::HMOCharge (BALL)   BuildBondsProcessor::Option (BALL)   RDFParameter (BALL)   TWriteLocker (BALL)   
CharmmConfigurationDialog (BALL::VIEW)   HybridisationProcessor (BALL)   BuriedPolar::Option (BALL)   RDFSection (BALL)   TypenameRuleProcessor (BALL)   
ClippingDialog (BALL::VIEW)   HydrogenBond (BALL)   CharmmFF::Option (BALL)   Receptor (BALL)   TypeRuleProcessor (BALL)   
ClippingPlane (BALL::VIEW)   HydrogenBondSlick (BALL)   CHPI::Option (BALL)   Reciprocal (BALL)   TemperatureFactorColorProcessor (BALL::VIEW)   
ColorButton (BALL::VIEW)   HydrophobicVdWSurface (BALL)   CHPISlick::Option (BALL)   ReconstructFragmentProcessor (BALL)   TestFramework (BALL::VIEW)   
ColorByGridProcessor (BALL::VIEW)   NMRStarFile::MonomericPolymer::HomologDB (BALL)   ConjugateGradientMinimizer::Option (BALL)   ReducedSurface (BALL)   TextEditorWidget (BALL::VIEW)   
ColorExtension2 (BALL::VIEW)   RecordHYDBND::HydrogenAtom (BALL::PDB)   CrystalGenerator::Option (BALL)   ReferenceArea (BALL)   TilingRenderer (BALL::VIEW)   
ColorHSV (BALL::VIEW)   RecordHYDBND::HydrogenPartnerAtom (BALL::PDB)   CrystalInfo::Option (BALL)   RegularExpression (BALL)   TrajectoryController (BALL::VIEW)   
ColoringSettingsDialog (BALL::VIEW)   HelperThread (BALL::SimpleDownloaderHelper)   ElectrostaticPotentialCalculator::Option (BALL)   ReissCavFreeEnergyProcessor (BALL)   TransformationEvent6D (BALL::VIEW)   
ColorMap (BALL::VIEW)   HBondModelProcessor (BALL::VIEW)   EmpiricalHSShiftProcessor::Option (BALL)   RelHydrophobicVdWSurface (BALL)   TransformationMessage (BALL::VIEW)   
ColorProcessor (BALL::VIEW)   HeadTrackingEvent (BALL::VIEW)   EnergyMinimizer::Option (BALL)   RelNegativePartialCharge (BALL)   TreeWidget (BALL::VIEW)   
ColorRGBA (BALL::VIEW)   HelpViewer (BALL::VIEW)   EvolutionaryDocking::Option (BALL)   RelNegativePolarVdWSurface (BALL)   TRenderWindow (BALL::VIEW)   
ColorTable (BALL::VIEW)   Hotkey (BALL::VIEW)   OutOfGrid (BALL::Exception)   RelNegativeVdWSurface (BALL)   Tube (BALL::VIEW)   
ColorUnit (BALL::VIEW)   HotkeyTable (BALL::VIEW)   OutOfMemory (BALL::Exception)   RelNumberOfRotatableBonds (BALL)   TwoColoredLine (BALL::VIEW)   
ColorUnitHue (BALL::VIEW)   HTMLView (BALL::VIEW)   OutOfRange (BALL::Exception)   RelNumberOfRotatableSingleBonds (BALL)   TwoColoredTube (BALL::VIEW)   
ComboBoxDelegate (BALL::VIEW)   HTMLViewDock (BALL::VIEW)   FDPB::Option (BALL)   RelPolarVdWSurface (BALL)   
  U  
CompositeManager (BALL::VIEW)   
  I  
FPTBondOrderStrategy::Option (BALL)   RelPositivePartialCharge (BALL)   
CompositeMessage (BALL::VIEW)   GAFFTypeProcessor::Option (BALL)   RelPositivePolarVdWSurface (BALL)   UnconnectedGraphException (BALL::GRAPH)   
CompositeProperties (BALL::VIEW)   Bit::IllegalOperation (BALL)   GeneralizedBornModel::Option (BALL)   RelPositiveVdWSurface (BALL)   UndoEliminateOperation (BALL::GRAPH)   
ConfigDialog (BALL::VIEW)   CIFFile::Item (BALL)   GeometricFit::Option (BALL)   Rescorer (BALL)   RecordCRYST1::UnitCell (BALL::PDB)   
ConnectionObject (BALL::VIEW)   Client::InvalidClient (BALL)   GridBasedScoring::Option (BALL)   Rescoring (BALL)   Structure::UnitCellInfo (BALL::PDB)   
ContourSurfaceDialog (BALL::VIEW)   Enumerator::IteratorTraits_ (BALL)   HBondProcessor::Option (BALL)   Rescoring1D (BALL)   UPThread (BALL::SimpleDownloaderHelper)   
ControlSelectionMessage (BALL::VIEW)   EnumeratorIndex::IncompatibleIndex (BALL)   HybridisationProcessor::Option (BALL)   Rescoring3D (BALL)   Substring::UnboundSubstring (BALL)   
CreateRepresentationMessage (BALL::VIEW)   IllegalPosition (BALL::Exception)   HydrogenBond::Option (BALL)   Rescoring4D (BALL)   UCK (BALL)   
CudaVolumeRenderer (BALL::VIEW)   IllegalSelfOperation (BALL::Exception)   HydrogenBondSlick::Option (BALL)   Rescoring::RescoreQSARData (BALL)   UhligCavFreeEnergyProcessor (BALL)   
CustomColorProcessor (BALL::VIEW)   IllegalTreeOperation (BALL::Exception)   IMGDock::Option (BALL)   Residue (BALL)   UnaryFunctor (BALL)   
DockResultDialog::Compare_ (BALL::VIEW)   IncompatibleIterators (BALL::Exception)   KGreedyBondOrderStrategy::Option (BALL)   ResidueChecker (BALL)   UnaryPredicate (BALL)   
  D  
IndexOverflow (BALL::Exception)   Lipophilic::Option (BALL)   ResidueIDPredicate (BALL)   UnaryProcessor (BALL)   
IndexUnderflow (BALL::Exception)   MMFF94::Option (BALL)   ResidueIteratorTraits (BALL)   UIntEditorWidget (BALL::VIEW)   
AmberFF::Default (BALL)   InvalidArgument (BALL::Exception)   MMFF94OutOfPlaneBend::OutOfPlaneBend (BALL)   ResiduePredicate (BALL)   UIOperationMode (BALL::VIEW)   
AromaticityProcessor::Default (BALL)   InvalidFormat (BALL::Exception)   MolecularDynamics::Option (BALL)   ResidueRotamerSet (BALL)   UndoManagerDialog (BALL::VIEW)   
AromaticRingStacking::Default (BALL)   InvalidIterator (BALL::Exception)   NonpolarSolvation::Option (BALL)   ResidueRotamerSet::RotamerProbabilityGreaterThan_ (BALL)   UpdateRepresentationThread (BALL::VIEW)   
AssignBondOrderProcessor::Default (BALL)   InvalidOption (BALL::Exception)   NumericalSAS::Option (BALL)   ResidueTorsions (BALL)   
  V  
AStarBondOrderStrategy::Default (BALL)   InvalidRange (BALL::Exception)   Object (BALL)   ResourceEntry (BALL)   
BinaryFingerprintMethods::Default (BALL)   InvalidSize (BALL::Exception)   ObjectCreator (BALL)   ResourceFile (BALL)   CharmmEEF1::Values (BALL)   
BindingPocketProcessor::Default (BALL)   IllegalStateException (BALL::GRAPH)   Options (BALL)   Result (BALL)   CosineTorsion::Values (BALL)   
BranchAndBoundBondOrderStrategy::Default (BALL)   HashMap::IllegalKey (BALL)   Pair6_12InteractionEnergyProcessor::Option (BALL)   Result::ResultData (BALL)   LennardJones::Values (BALL)   
BuildBondsProcessor::Default (BALL)   HashSet::IllegalKey (BALL)   Pair6_12RDFIntegrator::Option (BALL)   RGroupAssembler (BALL)   MMFF94VDWParameters::VDWEntry (BALL)   
BuriedPolar::Default (BALL)   HashSet::IteratorTraits (BALL)   PairExpInteractionEnergyProcessor::Option (BALL)   RingAnalyser (BALL)   MolDB::VendorInfo (BALL)   
CharmmEEF1::Data (BALL)   ILPBondOrderStrategy (BALL)   PairExpRDFIntegrator::Option (BALL)   RingAnalyser::Ring (BALL)   Potential1210::Values (BALL)   
CharmmFF::Default (BALL)   IMGDock (BALL)   PCMCavFreeEnergyProcessor::Option (BALL)   RingFinder (BALL)   Validation (BALL::QSAR)   
CHPI::Default (BALL)   INIFile (BALL)   PDBFile::Option (BALL)   RingPerceptionProcessor (BALL)   ValidationConfiguration (BALL::QSAR)   
CHPISlick::Default (BALL)   INIFile::IteratorTraits_ (BALL)   NameConverter::Option (BALL::Peptides)   RMSDMinimizer (BALL)   QuadraticAngleBend::Values (BALL)   
CIFFile::Datablock (BALL)   InRingPredicate (BALL)   PeriodicBoundary::Option (BALL)   RombergIntegrator (BALL)   QuadraticBondStretch::Values (BALL)   
CIFFile::Datacontent (BALL)   RecordDBREF::InitialDatabaseSegment (BALL::PDB)   PierottiCavFreeEnergyProcessor::Option (BALL)   Rotamer (BALL)   QuadraticImproperTorsion::Values (BALL)   
ConjugateGradientMinimizer::Default (BALL)   RecordDBREF::InitialSequence (BALL::PDB)   PolarSolvation::Option (BALL)   RotamerLibrary (BALL)   VanDerWaals (BALL)   
CosineTorsion::Data (BALL)   InconsistentUsage (BALL::QSAR::Exception)   PoseClustering::Option (BALL)   RotateBond (BALL)   VanDerWaalsSlick (BALL)   
CrystalGenerator::Default (BALL)   InvalidActivityID (BALL::QSAR::Exception)   OPLSModel (BALL::QSAR)   RotateBonds (BALL)   VdWSurface (BALL)   
CrystalInfo::Default (BALL)   InputConfiguration (BALL::QSAR)   ReissCavFreeEnergyProcessor::Option (BALL)   RotationalEntropy (BALL)   VdWVolume (BALL)   
DCDFile (BALL)   InputPartitioningConfiguration (BALL::QSAR)   RingPerceptionProcessor::Option (BALL)   RSComputer (BALL)   VertexAdjacency (BALL)   
Density (BALL)   ResourceEntry::IteratorTraits_ (BALL)   ScoringFunction::Option (BALL)   RSEdge (BALL)   VertexAdjacencyEquality (BALL)   
Descriptor (BALL)   RMSDMinimizer::IncompatibleCoordinateSets (BALL)   SDGenerator::Option (BALL)   RSFace (BALL)   VectorGridController (BALL::VIEW)   
DifferentiableScoringFunction (BALL)   Substring::InvalidSubstring (BALL)   ShiftedLVMMMinimizer::Option (BALL)   RSVertex (BALL)   Vertex (BALL::VIEW)   
DiffGridBasedScoring (BALL)   TRegularData2D::IndexType (BALL)   SideChainPlacementProcessor::Option (BALL)   RuleEvaluator (BALL)   Vertex2 (BALL::VIEW)   
Directory (BALL)   TRegularData3D::IndexType (BALL)   SLICKEnergy::Option (BALL)   RuleProcessor (BALL)   VIEWPlugin (BALL::VIEW)   
DisulfidBondProcessor (BALL)   IconLoader (BALL::VIEW)   SLICKScore::Option (BALL)   ScoringFunction::Result (BALL)   VRMLRenderer (BALL::VIEW)   
Division (BALL)   InputDeviceDriver (BALL::VIEW)   SnapShotManager::Option (BALL)   ScoringOptimizer::Result (BALL)   Visitor (BALL)   
DNAMutator (BALL)   InputDevPluginHandler (BALL::VIEW)   StrangLBFGSMinimizer::Option (BALL)   SmartsMatcher::RecStruct_ (BALL)   
  W  
DockingAlgorithm (BALL)   InputPlugin (BALL::VIEW)   UhligCavFreeEnergyProcessor::Option (BALL)   SmartsMatcher::RecStructCore_ (BALL)   
DockProblem (BALL)   IntEditorWidget (BALL::VIEW)   VanDerWaalsSlick::Option (BALL)   SmartsMatcher::RecStructPool_ (BALL)   WrongDataType (BALL::QSAR::Exception)   
DockResult (BALL)   InteractionMode (BALL::VIEW)   AtomOverview::OverviewProcessor (BALL::VIEW)   RaytraceableContourSurfaceDialog (BALL::VIEW)   WrongFileFormat (BALL::QSAR::Exception)   
DockResultFile (BALL)   InteractionModeManager (BALL::VIEW)   OccupancyColorProcessor (BALL::VIEW)   RaytraceableGrid (BALL::VIEW)   GLRenderer::WrongModes (BALL::VIEW)   
DoubleBondsPredicate (BALL)   InterpolateColorProcessor (BALL::VIEW)   OpenBruker1DFile (BALL::VIEW)   RaytraceableGridController (BALL::VIEW)   WriteLockerType   
DoubleGene (BALL)   
  J  
OpenBruker2DFile (BALL::VIEW)   RaytracingRenderer (BALL::VIEW)   
  X  
DoubleParameter (BALL)   OpenSavePreferences (BALL::VIEW)   RegisterHelpSystemMessage (BALL::VIEW)   
DoubleTraits (BALL)   JCAMPFile (BALL)   SDWidget::Option (BALL::VIEW)   RegularData1DWidget (BALL::VIEW)   XML3DRenderer (BALL::VIEW)   
DSN6File (BALL)   JCAMPFile::JCAMPValue (BALL)   
  P  
RegularData2DWidget (BALL::VIEW)   XML3DRenderer::XML3DRendererClippingPlane (BALL::VIEW)   
ElectrostaticPotentialCalculator::Default (BALL)   JohnsonBoveyShiftProcessor (BALL)   RegularData3DController (BALL::VIEW)   XDRPersistenceManager (BALL)   
EmpiricalHSShiftProcessor::Default (BALL)   
  K  
EmpiricalHSShiftProcessor::PropertiesForShift_ (BALL)   Renderer (BALL::VIEW)   XYZFile (BALL)   
EnergyMinimizer::Default (BALL)   ParseError (BALL::Exception)   RenderSetup (BALL::VIEW)   
  Z  
EvolutionaryDocking::Default (BALL)   KCFFile (BALL)   Postcondition (BALL::Exception)   RenderTarget (BALL::VIEW)   
DivisionByZero (BALL::Exception)   Kekuliser (BALL)   Precondition (BALL::Exception)   RenderToBufferFinishedEvent (BALL::VIEW)   ZagrebIndex (BALL)   
FDPB::Default (BALL)   KernelPredicate (BALL)   GeometricFit::Peak_ (BALL)   Representation (BALL::VIEW)   
  b  
FDPB::DielectricSmoothing (BALL)   KernelPredicate< Atom > (BALL)   PostOrderFolding (BALL::GRAPH)   RepresentationManager (BALL::VIEW)   
FPTBondOrderStrategy::Default (BALL)   KernelPredicate< Chain > (BALL)   HBondProcessor::PredictionMethod (BALL)   RepresentationMessage (BALL::VIEW)   GAMESSDatFile::block (BALL)   
FPTBondOrderStrategy::DPBackTracking_ (BALL)   KernelPredicate< Fragment > (BALL)   MOLFile::Property (BALL)   ResidueNameColorProcessor (BALL::VIEW)   
  c  
FPTBondOrderStrategy::DPBackTrackingCombiner_ (BALL)   KernelPredicate< Molecule > (BALL)   Pair6_12InteractionEnergyProcessor (BALL)   ResidueNumberColorProcessor (BALL::VIEW)   
FPTBondOrderStrategy::DPConfig_ (BALL)   KernelPredicate< Protein > (BALL)   Pair6_12RDFIntegrator (BALL)   ResidueTypeColorProcessor (BALL::VIEW)   hash< RTpieCpp::InstanceHandle >::conv (boost)   
FPTBondOrderStrategy::DPJoinMapComparator_ (BALL)   KernelPredicate< Residue > (BALL)   PairExpInteractionEnergyProcessor (BALL)   Resolution (BALL::VIEW)   hash< RTpieCpp::MeshHandle >::conv (boost)   
FPTBondOrderStrategy::DPTable_ (BALL)   KGreedyBondOrderStrategy (BALL)   PairExpRDFIntegrator (BALL)   RotateMode (BALL::VIEW)   
  h  
GAFFTypeProcessor::Default (BALL)   KernelParameterError (BALL::QSAR::Exception)   ParameterDescription (BALL)   RTfactRenderer (BALL::VIEW)   
GeneralizedBornModel::Default (BALL)   Kernel (BALL::QSAR)   Parameters (BALL)   RTfactRenderer::RTfactData (BALL::VIEW)   hash< BALL::Quadruple< T1, T2, T3, T4 > > (boost)   
GeometricFit::Default (BALL)   KernelModel (BALL::QSAR)   ParameterSection (BALL)   RunGAMESSDialog (BALL::VIEW)   hash< BALL::SortedPosition2 > (boost)   
A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Z