#include <BALL/STRUCTURE/triangulatedSES.h>

Inheritance diagram for BALL::TriangulatedSES:

Public Member Functions
Constructors and Destructors
	TriangulatedSES ()

	TriangulatedSES (const TriangulatedSES &surface, bool=true)

	TriangulatedSES (SolventExcludedSurface *ses, const double &density)

virtual	~TriangulatedSES ()

Assignment
void	set (const TriangulatedSES &surface, bool=true)

TriangulatedSES &	operator= (const TriangulatedSES &surface)

void	setDensity (const double &density)

double	getDensity () const

Public Member Functions inherited from BALL::TriangulatedSurface
	TriangulatedSurface ()

	TriangulatedSurface (const TriangulatedSurface &surface, bool=true)

virtual	~TriangulatedSurface ()

void	clear ()

void	set (const TriangulatedSurface &surface, bool=true)

TriangulatedSurface &	operator= (const TriangulatedSurface &surface)

void	insert (TrianglePoint *point)

void	insert (TriangleEdge *edge)

void	insert (Triangle *triangle)

BALL_DEPRECATED Size	numberOfPoints () const

Size	getNumberOfPoints () const

BALL_DEPRECATED Size	numberOfEdges () const

Size	getNumberOfEdges () const

BALL_DEPRECATED Size	numberOfTriangles () const

Size	getNumberOfTriangles () const

void	remove (TrianglePoint *point, bool deep=true)

void	remove (PointIterator p, bool deep=true)

void	remove (TriangleEdge *edge, bool deep=true)

void	remove (EdgeIterator e, bool deep=true)

void	remove (Triangle *triangle, bool deep=true)

void	remove (TriangleIterator t, bool deep=true)

void	exportSurface (Surface &surface)

TriangulatedSurface &	operator+= (const TriangulatedSurface &surface)

void	join (TriangulatedSurface &source)

void	shift (const TVector3< double > &c)

void	blowUp (const double &r)

void	setIndices ()

void	setDensity (const double &density)

double	getDensity () const

void	cut (const TPlane3< double > &plane, const double &fuzzy=0)

void	shrink ()

void	deleteIsolatedEdges ()

void	deleteIsolatedPoints ()

void	getBorder (std::list< TriangleEdge * > &border)

PointIterator	beginPoint ()

ConstPointIterator	beginPoint () const

PointIterator	endPoint ()

ConstPointIterator	endPoint () const

EdgeIterator	beginEdge ()

ConstEdgeIterator	beginEdge () const

EdgeIterator	endEdge ()

ConstEdgeIterator	endEdge () const

TriangleIterator	beginTriangle ()

ConstTriangleIterator	beginTriangle () const

TriangleIterator	endTriangle ()

ConstTriangleIterator	endTriangle () const

Friends
Class friends
class SESTriangulator
class	SESTriangulator

Accessors
SolventExcludedSurface *	ses_

double	density_

void	compute () throw (Exception::GeneralException,Exception::DivisionByZero)

Additional Inherited Members
Public Types inherited from BALL::TriangulatedSurface
typedef std::list < TrianglePoint * >::iterator	PointIterator

typedef std::list < TrianglePoint * > ::const_iterator	ConstPointIterator

typedef std::list < TriangleEdge * >::iterator	EdgeIterator

typedef std::list < TriangleEdge * > ::const_iterator	ConstEdgeIterator

typedef std::list< Triangle * > ::iterator	TriangleIterator

typedef std::list< Triangle * > ::const_iterator	ConstTriangleIterator

Static Public Member Functions inherited from BALL::TriangulatedSurface
static TriangulatedSurface *	createTube (unsigned int num_vertices, unsigned int subdiv=0, bool closed=false, bool out=true)

static TriangulatedSurface *	createDisk (unsigned int num_vertices, bool out=true)

Protected Member Functions inherited from BALL::TriangulatedSurface
bool	canBeCopied () const

void	copy (const TriangulatedSurface &surface)

Protected Attributes inherited from BALL::TriangulatedSurface
Size	number_of_points_

std::list< TrianglePoint * >	points_

Size	number_of_edges_

std::list< TriangleEdge * >	edges_

Size	number_of_triangles_

std::list< Triangle * >	triangles_

double	density_

Detailed Description

Generic TriangulatedSES Class.

Definition at line 54 of file triangulatedSES.h.

Constructor & Destructor Documentation

BALL::TriangulatedSES::TriangulatedSES ( )

Default constructor. This method creates a new TriangulatedSES object.

BALL::TriangulatedSES::TriangulatedSES	(	const TriangulatedSES &	surface,
		bool	= `true`
	)

Copy constructor. Create a new TriangulatedSES object from another.

Parameters

surface	the TriangulatedSES object to be copied
bool	ignored - just for interface consistency

BALL::TriangulatedSES::TriangulatedSES	(	SolventExcludedSurface *	ses,
		const double &	density
	)

Detailed constructor. Create a new empty TriangulatedSES object and set its SES.

Parameters

ses	a pointer to the corresponding SES
density	the density to use by triangulation

virtual BALL::TriangulatedSES::~TriangulatedSES ( )

virtual

Destructor. Destructs the TriangulatedSES object.

Member Function Documentation

void BALL::TriangulatedSES::compute	(		)
throw	(	Exception::GeneralException,
		Exception::DivisionByZero
	)

double BALL::TriangulatedSES::getDensity ( ) const

Get the density used by triangulation.

TriangulatedSES& BALL::TriangulatedSES::operator= ( const TriangulatedSES & surface )

Assign from another TriangulatedSES.

Parameters

surface the TriangulatedSES object to assign from

void BALL::TriangulatedSES::set	(	const TriangulatedSES &	surface,
		bool	= `true`
	)

Assign from another TriangulatedSES.

Parameters

surface	the TriangulatedSES object to assign from
bool	ignored - just for interface consistency

void BALL::TriangulatedSES::setDensity ( const double & density )

Set the density used by triangulation.

Friends And Related Function Documentation

friend class SESTriangulator

friend

Definition at line 64 of file triangulatedSES.h.

Member Data Documentation

double BALL::TriangulatedSES::density_

protected

Definition at line 147 of file triangulatedSES.h.

SolventExcludedSurface* BALL::TriangulatedSES::ses_

protected

Definition at line 145 of file triangulatedSES.h.

Public Member Functions

Friends

Accessors

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation