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BALL::JCAMPFile Class Reference

#include <BALL/FORMAT/JCAMPFile.h>

Inheritance diagram for BALL::JCAMPFile:
BALL::LineBasedFile BALL::File

Classes

class  JCAMPValue
 

Public Types

enum  ContentType { STRING, NUMERIC, ARRAY }
 
typedef std::pair< String,
JCAMPValue
KeyValuePair
 a key-value pair More...
 
typedef StringHashMap< JCAMPValueEntryMap
 A hash map containing the JCAMP entries. More...
 
typedef StringHashMap< StringHeaderMap
 A hash map containing the header entries. More...
 
- Public Types inherited from BALL::File
typedef std::ios::openmode OpenMode
 
enum  Transformation { TRANSFORMATION__EXEC = 1, TRANSFORMATION__FILTER = 2, TRANSFORMATION__URL = 3 }
 
enum  Type {
  TYPE__UNKNOWN = 0, TYPE__DIRECTORY = 1, TYPE__CHAR_SPECIAL_FILE = 2, TYPE__BLOCK_SPECIAL_FILE = 3,
  TYPE__REGULAR_FILE = 4, TYPE__SYMBOLIC_LINK = 5, TYPE__SOCKET = 6, TYPE__FIFO_SPECIAL_FILE = 7
}
 

Public Member Functions

Constructors and Destructors
 JCAMPFile ()
 
 JCAMPFile (const String &name, OpenMode open_mode=std::ios::in)
 
virtual ~JCAMPFile ()
 
Accessors
void read ()
 
bool write ()
 
HeaderMapgetHeader ()
 
const HeaderMapgetHeader () const
 
EntryMapgetEntries ()
 
const EntryMapgetEntries () const
 
const JCAMPValueoperator[] (const String &name) const
 
double getDoubleValue (const String &name) const
 
Index getIntValue (const String &name) const
 
bool hasEntry (const String &name) const
 
bool hasHeader (const String &name) const
 
const JCAMPFileoperator= (const JCAMPFile &file)
 
Equality operators
bool operator== (const JCAMPFile &f) const
 
bool operator!= (const JCAMPFile &f) const
 
- Public Member Functions inherited from BALL::LineBasedFile
 LineBasedFile ()
 Default constructor. More...
 
 LineBasedFile (const String &filename, File::OpenMode open_mode=std::ios::in, bool trim_whitespaces=false)
 
void clear ()
 
bool operator== (const LineBasedFile &f)
 
bool operator!= (const LineBasedFile &f)
 
const LineBasedFileoperator= (const LineBasedFile &file)
 
Position getLineNumber () const
 Get the last line number in the file. More...
 
const StringgetLine () const
 Return the current line. More...
 
StringgetLine ()
 Return the current line. More...
 
bool readLine ()
 
bool skipLines (Size number=1)
 
bool search (const String &text, bool return_to_start=false)
 
bool search (const String &text, const String &stop, bool return_to_start=false)
 
bool gotoLine (Position line_number)
 
void rewind ()
 
void test (const char *file, int line, bool condition, const String &msg) const
 
String getField (Index pos=0, const String &quotes="", const String &delimiters=String::CHARACTER_CLASS__WHITESPACE) const
 
bool startsWith (const String &text) const
 Test if the current line starts with text. More...
 
bool has (const String &text) const
 Return true if the current line contains text. More...
 
Index switchString (const std::vector< String > &data) const
 
bool parseColumnFormat (const char *format, Position index, Size length, void *arg)
 
void enableTrimWhitespaces (bool state)
 Set wheter leading and trailing whitespaces in lines shall be removed. More...
 
bool trimWhiteSpacesEnabled () const
 
- Public Member Functions inherited from BALL::File
 File ()
 
 File (const String &name, OpenMode open_mode=std::ios::in)
 
virtual ~File ()
 
bool isValid () const
 
bool open (const String &name, File::OpenMode open_mode=std::ios::in)
 
bool reopen ()
 
bool reopen (File::OpenMode open_mode)
 
void close ()
 
const StringgetName () const
 
void setName (const String &name)
 
const StringgetOriginalName () const
 
Size getSize ()
 
File::OpenMode getOpenMode () const
 
Type getType (bool trace_link) const
 
bool copyTo (const String &destination_name, Size buffer_size=4096)
 
bool moveTo (const String &destination_name)
 
bool remove ()
 
bool renameTo (const String &new_path)
 
bool truncate (Size size=0)
 
std::fstream & getFileStream ()
 
TransformationManagergetTransformationManager ()
 
const TransformationManagergetTransformationManager () const
 
bool operator== (const File &file) const
 
bool operator!= (const File &file) const
 
bool isOpen () const
 
bool isClosed () const
 
bool isAccessible () const
 
bool isCanonized () const
 
bool isReadable () const
 
bool isWritable () const
 
bool isExecutable () const
 

Protected Attributes

HeaderMap header_
 Entries from the header section. More...
 
EntryMap entries_
 Entries from the key-value section. More...
 
- Protected Attributes inherited from BALL::LineBasedFile
String line_
 buffer for the line in use More...
 
Position line_number_
 line number in the file More...
 
bool trim_whitespaces_
 
vector< char > col_buffer_
 buffer for column parsing More...
 
- Protected Attributes inherited from BALL::File
String name_
 
String original_name_
 
OpenMode open_mode_
 
bool is_open_
 
bool is_temporary_
 

Additional Inherited Members

- Static Public Member Functions inherited from BALL::File
static Size getSize (String name)
 
static Type getType (String name, bool trace_link)
 
static bool copy (String source_name, String destination_name, Size buffer_size=4096)
 
static bool move (const String &source_name, const String &destination_name)
 
static bool remove (String name)
 
static bool rename (String old_path, String new_path)
 
static bool truncate (String path, Size size=0)
 
static bool createTemporaryFilename (String &temporary, const String &suffix=".TMP")
 
static void enableTransformation (Transformation transformation)
 
static void disableTransformation (Transformation transformation)
 
static bool isTransformationEnabled (Transformation transformation)
 
static void registerTransformation (const String &pattern, const String &exec)
 
static void unregisterTransformation (const String &pattern)
 
static bool isAccessible (String name)
 
static bool isReadable (String name)
 
static bool isWritable (String name)
 
static bool isExecutable (String name)
 
- Static Public Attributes inherited from BALL::File
static const OpenMode MODE_IN
 Open for input (default) More...
 
static const OpenMode MODE_OUT
 Open for output. More...
 
static const OpenMode MODE_APP
 Append. Seek to end before each write operation. More...
 
static const OpenMode MODE_BINARY
 Binary mode. More...
 
static const OpenMode MODE_ATE
 Seek to end directly after opening. More...
 
static const OpenMode MODE_TRUNC
 Truncate an existing file. More...
 
static const String TRANSFORMATION_EXEC_PREFIX
 Prefix for filenames that are created through the execution of commands "exec:". More...
 
static const String TRANSFORMATION_FILE_PREFIX
 Prefix for files (to mimick URL-like behavior) "file:". More...
 
static const String TRANSFORMATION_FTP_PREFIX
 Prefix for FTP-transfers "ftp://". More...
 
static const String TRANSFORMATION_HTTP_PREFIX
 Prefix for HTTP-transfer "http://". More...
 
- Static Protected Attributes inherited from BALL::File
static HashSet< Stringcreated_temp_filenames_
 
static TransformationManager transformation_manager_
 
static Size transformation_methods_
 

Detailed Description

JCAMP file class. This class parses JCAMP files, which are often used to store parameter files in spectroscopy (NMR, IR, MS), e.g. in Bruker instruments.

This class has rudimentary support for the format only. The most severe drawback currently is the lack of support for writing JCAMP files.

Definition at line 28 of file JCAMPFile.h.

Member Typedef Documentation

A hash map containing the JCAMP entries.

Definition at line 69 of file JCAMPFile.h.

A hash map containing the header entries.

Definition at line 72 of file JCAMPFile.h.

a key-value pair

Definition at line 66 of file JCAMPFile.h.

Member Enumeration Documentation

Type definitions

Enumerator
STRING 
NUMERIC 
ARRAY 

Definition at line 37 of file JCAMPFile.h.

Constructor & Destructor Documentation

BALL::JCAMPFile::JCAMPFile ( )
inline

Default constructor

Definition at line 81 of file JCAMPFile.h.

BALL::JCAMPFile::JCAMPFile ( const String name,
OpenMode  open_mode = std::ios::in 
)

Detailed constructor

Exceptions
Exception::FileNotFoundif the file could not be opened
virtual BALL::JCAMPFile::~JCAMPFile ( )
inlinevirtual

Destructor

Definition at line 90 of file JCAMPFile.h.

Member Function Documentation

double BALL::JCAMPFile::getDoubleValue ( const String name) const

Return a double value for key name

Exceptions
Exception::InvalidFormatif the value is not a floating point number
EntryMap& BALL::JCAMPFile::getEntries ( )
inline

Definition at line 114 of file JCAMPFile.h.

const EntryMap& BALL::JCAMPFile::getEntries ( ) const
inline

Definition at line 117 of file JCAMPFile.h.

HeaderMap& BALL::JCAMPFile::getHeader ( )
inline

Definition at line 108 of file JCAMPFile.h.

const HeaderMap& BALL::JCAMPFile::getHeader ( ) const
inline

Definition at line 111 of file JCAMPFile.h.

Index BALL::JCAMPFile::getIntValue ( const String name) const

Return an int value for key name

Exceptions
Exception::InvalidFormatif the value is not convertible to an int
bool BALL::JCAMPFile::hasEntry ( const String name) const
inline

Definition at line 133 of file JCAMPFile.h.

bool BALL::JCAMPFile::hasHeader ( const String name) const
inline

Definition at line 136 of file JCAMPFile.h.

bool BALL::JCAMPFile::operator!= ( const JCAMPFile f) const

Inequality operator

const JCAMPFile& BALL::JCAMPFile::operator= ( const JCAMPFile file)
bool BALL::JCAMPFile::operator== ( const JCAMPFile f) const

Equality operator

const JCAMPValue& BALL::JCAMPFile::operator[] ( const String name) const
inline

Definition at line 120 of file JCAMPFile.h.

void BALL::JCAMPFile::read ( )

Read the file.

Exceptions
Exception::ParseErrorif a syntax error was encountered
bool BALL::JCAMPFile::write ( )

Write the file.

Exceptions
File::CannotWriteif writing to the file failed

Member Data Documentation

EntryMap BALL::JCAMPFile::entries_
protected

Entries from the key-value section.

Definition at line 162 of file JCAMPFile.h.

HeaderMap BALL::JCAMPFile::header_
protected

Entries from the header section.

Definition at line 159 of file JCAMPFile.h.