BALL  1.4.79
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Public Member Functions | List of all members
BALL::AdvancedElectrostatic Class Reference

#include <BALL/SCORING/COMPONENTS/advElectrostatic.h>

Inheritance diagram for BALL::AdvancedElectrostatic:
BALL::Electrostatic BALL::ScoringComponent

Public Member Functions

 AdvancedElectrostatic (ScoringFunction *sf, Options &options, ForceFieldParameters &forcefield_parameters)
 
 AdvancedElectrostatic (ScoringFunction *sf, VanDerWaals *vdw)
 
double calculateDielectricConstant (Vector3 &atom1, Vector3 &atom2)
 
- Public Member Functions inherited from BALL::Electrostatic
 Electrostatic (Options &options, ForceFieldParameters &forcefield_parameters)
 
 Electrostatic (VanDerWaals *vdw)
 
 ~Electrostatic ()
 
void update (const vector< std::pair< Atom *, Atom * > > &pair_vector)
 
double updateScore ()
 
AmberNonBondedgetAmberNonBonded ()
 
- Public Member Functions inherited from BALL::ScoringComponent
 ScoringComponent ()
 
 ScoringComponent (const ScoringComponent &sc)
 
 ScoringComponent (ScoringFunction &sf)
 
void selectBaseFunction (String function)
 
virtual ~ScoringComponent ()
 
virtual void clear ()
 
virtual bool setup ()
 
virtual void setupLigand ()
 
ScoringFunctiongetScoringFunction () const
 
void setScoringFunction (ScoringFunction &sf)
 
String getName () const
 
void setName (const String &name)
 
const StringgetTypeName ()
 
double getRawScore () const
 
double getScaledScore () const
 
virtual void setLigandIntraMolecular (bool b)
 
bool isLigandIntraMolecular ()
 
bool isGridable ()
 
bool isAtomPairwise ()
 
void setCoefficient (const double &coeff)
 
const doublegetCoefficient ()
 
void setNormalizationParameters (double stddev, double mean)
 
void getNormalizationParameters (double &stddev, double &mean)
 
bool isEnabled ()
 
void enable ()
 
void disable ()
 

Additional Inherited Members

- Protected Member Functions inherited from BALL::ScoringComponent
double scaleScore (double score) const
 
- Protected Attributes inherited from BALL::Electrostatic
AmberNonBondedamber_nb_
 
- Protected Attributes inherited from BALL::ScoringComponent
bool ligand_intra_molecular_
 
bool gridable_
 
bool atom_pairwise_
 
ScoringFunctionscoring_function_
 
ScoringBaseFunctionbase_function_
 
double score_
 
double coefficient_
 
double stddev_
 
double mean_
 
bool enabled_
 
String type_name_
 

Detailed Description

Definition at line 14 of file advElectrostatic.h.

Constructor & Destructor Documentation

BALL::AdvancedElectrostatic::AdvancedElectrostatic ( ScoringFunction sf,
Options options,
ForceFieldParameters forcefield_parameters 
)
BALL::AdvancedElectrostatic::AdvancedElectrostatic ( ScoringFunction sf,
VanDerWaals vdw 
)

Member Function Documentation

double BALL::AdvancedElectrostatic::calculateDielectricConstant ( Vector3 atom1,
Vector3 atom2 
)