BALL  1.4.79
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Classes | List of all members
BALL::CHPI Class Reference

#include <BALL/SCORING/COMPONENTS/CHPI.h>

Inheritance diagram for BALL::CHPI:
BALL::ScoringComponent

Classes

class  AromaticRing
 
class  CHGroup
 
struct  Default
 
struct  Option
 

Public Member Functions

Constructors and Destructors
 CHPI ()
 
 CHPI (ScoringFunction &sf)
 
 CHPI (const CHPI &chpi)
 
virtual ~CHPI ()
 
Assignment
const CHPIoperator= (const CHPI &chpi)
 
virtual void clear ()
 
Predicates.
bool operator== (const CHPI &chpi) const
 
- Public Member Functions inherited from BALL::ScoringComponent
 ScoringComponent ()
 
 ScoringComponent (const ScoringComponent &sc)
 
 ScoringComponent (ScoringFunction &sf)
 
void selectBaseFunction (String function)
 
virtual ~ScoringComponent ()
 
ScoringFunctiongetScoringFunction () const
 
void setScoringFunction (ScoringFunction &sf)
 
String getName () const
 
void setName (const String &name)
 
const StringgetTypeName ()
 
double getRawScore () const
 
double getScaledScore () const
 
virtual void setLigandIntraMolecular (bool b)
 
bool isLigandIntraMolecular ()
 
bool isGridable ()
 
bool isAtomPairwise ()
 
void setCoefficient (const double &coeff)
 
const doublegetCoefficient ()
 
void setNormalizationParameters (double stddev, double mean)
 
void getNormalizationParameters (double &stddev, double &mean)
 
bool isEnabled ()
 
void enable ()
 
void disable ()
 

Setup Methods

Options options
 
virtual bool setup ()
 
void setupLigand ()
 
void update (const vector< std::pair< Atom *, Atom * > > &)
 
virtual double updateScore ()
 

Additional Inherited Members

- Protected Member Functions inherited from BALL::ScoringComponent
double scaleScore (double score) const
 
- Protected Attributes inherited from BALL::ScoringComponent
bool ligand_intra_molecular_
 
bool gridable_
 
bool atom_pairwise_
 
ScoringFunctionscoring_function_
 
ScoringBaseFunctionbase_function_
 
double score_
 
double coefficient_
 
double stddev_
 
double mean_
 
bool enabled_
 
String type_name_
 

Detailed Description

SLICK ringstacking component. { Definition:} {BALL/SCORING/COMPONENTS/CHPI.h}

Definition at line 20 of file CHPI.h.

Constructor & Destructor Documentation

BALL::CHPI::CHPI ( )

Default constructor.

BALL::CHPI::CHPI ( ScoringFunction sf)

Constructor.

BALL::CHPI::CHPI ( const CHPI chpi)

Copy constructor

virtual BALL::CHPI::~CHPI ( )
virtual

Destructor.

Member Function Documentation

virtual void BALL::CHPI::clear ( )
virtual

Clear method.

Reimplemented from BALL::ScoringComponent.

const CHPI& BALL::CHPI::operator= ( const CHPI chpi)

Assignment.

bool BALL::CHPI::operator== ( const CHPI chpi) const
virtual bool BALL::CHPI::setup ( )
virtual

Setup method.

Reimplemented from BALL::ScoringComponent.

void BALL::CHPI::setupLigand ( )
virtual

Function that needs to be called once for every new ligand.
The default implementation of this base class does nothing and should be overloaded by derived classes if necessary.

Reimplemented from BALL::ScoringComponent.

void BALL::CHPI::update ( const vector< std::pair< Atom *, Atom * > > &  pair_vector)
virtual

Update this ScoringComponent using the given atom-pairs.
This function should be overloaded by all ScoringComponents

Reimplemented from BALL::ScoringComponent.

virtual double BALL::CHPI::updateScore ( )
virtual

Calculates and returns the component's energy.

Reimplemented from BALL::ScoringComponent.

Member Data Documentation

Options BALL::CHPI::options

Definition at line 239 of file CHPI.h.