#include <BALL/STRUCTURE/binaryFingerprintMethods.h>

Static Public Attributes
static const String	BLOCKSIZE

static const String	SIM_CUTOFF

static const String	PRECISION

static const String	STORE_NN

static const String	MAX_CLUSTERS

static const String	N_THREADS

static const String	VERBOSITY

Detailed Description

Options

Definition at line 94 of file binaryFingerprintMethods.h.

Member Data Documentation

const String BALL::BinaryFingerprintMethods::Option::BLOCKSIZE

static

The number of molecules which are grouped together to form a single inverted index data structure.

Definition at line 99 of file binaryFingerprintMethods.h.

const String BALL::BinaryFingerprintMethods::Option::MAX_CLUSTERS

static

Maximal number of clusters for which the similarity half-matrix is calculated in the clustering step. This value is by default set to 10000 and larger values have to be HANDLED WITH CARE due to quadratic memory requirements.

Definition at line 120 of file binaryFingerprintMethods.h.

const String BALL::BinaryFingerprintMethods::Option::N_THREADS

static

Number of parallel threads to be used. Parallelization via BOOST threads.

Definition at line 125 of file binaryFingerprintMethods.h.

const String BALL::BinaryFingerprintMethods::Option::PRECISION

static

Floating point precision for comparisons of similarity coefficents.

Definition at line 109 of file binaryFingerprintMethods.h.

const String BALL::BinaryFingerprintMethods::Option::SIM_CUTOFF

static

The similarity cutoff which is used for connected components decomposition or similarity search.