BALL  1.4.79
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BALL::StructurePreparer Member List

This is the complete list of members for BALL::StructurePreparer, including all inherited members.

assignAtomTypes(AtomContainer *at, String iniFile, String AtomType_file="")BALL::StructurePreparer
assignCharges(AtomContainer *at, int overwrite_mode)BALL::StructurePreparer
assignMMFF94AtomTypes(AtomContainer *at)BALL::StructurePreparer
assignPLPAtomTypes(AtomContainer *at)BALL::StructurePreparer
assignProteinCharges(AtomContainer *at, String parameterFile, int overwrite_mode)BALL::StructurePreparer
assignSimpleAtomTypes(AtomContainer *at, String iniFile)BALL::StructurePreparer
buildBonds(AtomContainer *at)BALL::StructurePreparer
getSimpleAtomTypes()BALL::StructurePreparer
prepare(AtomContainer *at, String parameterFile, String AtomType_file="")BALL::StructurePreparer
saturate(AtomContainer *at)BALL::StructurePreparer
selectHeavyAtoms(AtomContainer *at)BALL::StructurePreparer
setScoringType(String type)BALL::StructurePreparer
setSimpleAtomTypes(std::set< String > &new_types)BALL::StructurePreparer
StructurePreparer(String type="", bool ignore=0)BALL::StructurePreparer