#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h>
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h>
#include <OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h>
#include <OpenMS/CONCEPT/VersionInfo.h>
#include <OpenMS/FORMAT/IdXMLFile.h>
#include <OpenMS/FORMAT/FeatureXMLFile.h>
#include <OpenMS/FORMAT/ConsensusXMLFile.h>
#include <OpenMS/FORMAT/FileHandler.h>
#include <OpenMS/FORMAT/FileTypes.h>
#include <OpenMS/CHEMISTRY/ProteaseDB.h>
#include <unordered_set>