ConsensusMapNormalizerAlgorithmQuantile Class Reference

Algorithms of ConsensusMapNormalizer. More...

#include <OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h>

Public Member Functions
	ConsensusMapNormalizerAlgorithmQuantile ()
	default constructor is not implemented -> private
virtual	~ConsensusMapNormalizerAlgorithmQuantile ()
	destructor is not implemented -> private

Static Public Member Functions
static void	normalizeMaps (ConsensusMap &map)
	normalizes the maps of the consensusMap
static void	resample (const std::vector< double > &data_in, std::vector< double > &data_out, UInt n_resampling_points)
	resamples data_in and writes the results to data_out
static void	extractIntensityVectors (const ConsensusMap &map, std::vector< std::vector< double > > &out_intensities)
	extracts the intensities of the features of the different maps
static void	setNormalizedIntensityValues (const std::vector< std::vector< double > > &feature_ints, ConsensusMap &map)
	writes the intensity values in feature_ints to the corresponding features in map

Private Member Functions
	ConsensusMapNormalizerAlgorithmQuantile (const ConsensusMapNormalizerAlgorithmQuantile &copyin)
	copy constructor is not implemented -> private
ConsensusMapNormalizerAlgorithmQuantile &	operator= (const ConsensusMapNormalizerAlgorithmQuantile &rhs)
	assignment operator is not implemented -> private

Detailed Description

Algorithms of ConsensusMapNormalizer.

Constructor & Destructor Documentation

ConsensusMapNormalizerAlgorithmQuantile() [1/2]

ConsensusMapNormalizerAlgorithmQuantile ( const ConsensusMapNormalizerAlgorithmQuantile &  copyin )

private

copy constructor is not implemented -> private

ConsensusMapNormalizerAlgorithmQuantile() [2/2]

ConsensusMapNormalizerAlgorithmQuantile

(

)

default constructor is not implemented -> private

~ConsensusMapNormalizerAlgorithmQuantile()

virtual ~ConsensusMapNormalizerAlgorithmQuantile ( )

virtual

destructor is not implemented -> private

Member Function Documentation

extractIntensityVectors()

static void extractIntensityVectors ( const ConsensusMap &  map, std::vector< std::vector< double > > &  out_intensities  )

static

extracts the intensities of the features of the different maps

Parameters

[in]	map	ConsensusMap
[out]	out_intensities	resulting data, contains the feature intensities for each map of the consensus map

normalizeMaps()

static void normalizeMaps ( ConsensusMap &  map )

static

normalizes the maps of the consensusMap

Parameters

[in,out]

map

ConsensusMap

operator=()

ConsensusMapNormalizerAlgorithmQuantile & operator= ( const ConsensusMapNormalizerAlgorithmQuantile &  rhs )

private

assignment operator is not implemented -> private

resample()

static void resample ( const std::vector< double > &  data_in, std::vector< double > &  data_out, UInt  n_resampling_points  )

static

resamples data_in and writes the results to data_out

Parameters

[in]	data_in	the data to be resampled
[out]	data_out	the results are written to this vector
[in]	n_resampling_points	the number of points to resample from data_in

setNormalizedIntensityValues()

static void setNormalizedIntensityValues ( const std::vector< std::vector< double > > &  feature_ints, ConsensusMap &  map  )

static

writes the intensity values in feature_ints to the corresponding features in map

Parameters

[in]	feature_ints	contains the new feature intensities for each map of the consensus map
[in]	map	ConsensusMap the map to be updated