OpenMS::NuXLPresets Namespace Reference

Functions
StringList	getAllPresetsNames (const String &custom_presets_file="")
	Get all available presets names from JSON file. More...
void	getPresets (const String &p, const String &custom_presets_file, StringList &nucleotides, StringList &mapping, StringList &modifications, StringList &fragment_adducts, String &can_cross_link)
	Get preset parameters for a given preset name. More...
void	getPresets (const String &p, StringList &nucleotides, StringList &mapping, StringList &modifications, StringList &fragment_adducts, String &can_cross_link)
	Get preset parameters for a given preset name (using default presets file) More...

Function Documentation

getAllPresetsNames()

StringList OpenMS::NuXLPresets::getAllPresetsNames

(

const String &

custom_presets_file = ""

)

Get all available presets names from JSON file.

Parameters

custom_presets_file

Optional path to a custom presets file

Returns

StringList containing all available preset names

getPresets() [1/2]

void OpenMS::NuXLPresets::getPresets	(	const String &	p,
		const String &	custom_presets_file,
		StringList &	nucleotides,
		StringList &	mapping,
		StringList &	modifications,
		StringList &	fragment_adducts,
		String &	can_cross_link
	)

Get preset parameters for a given preset name.

Parameters

p	The preset name
custom_presets_file	Optional path to a custom presets file
nucleotides	Output parameter for nucleotides
mapping	Output parameter for mapping
modifications	Output parameter for modifications
fragment_adducts	Output parameter for fragment adducts
can_cross_link	Output parameter for can_cross_link

getPresets() [2/2]

void OpenMS::NuXLPresets::getPresets	(	const String &	p,
		StringList &	nucleotides,
		StringList &	mapping,
		StringList &	modifications,
		StringList &	fragment_adducts,
		String &	can_cross_link
	)

Get preset parameters for a given preset name (using default presets file)

Parameters

p	The preset name
nucleotides	Output parameter for nucleotides
mapping	Output parameter for mapping
modifications	Output parameter for modifications
fragment_adducts	Output parameter for fragment adducts
can_cross_link	Output parameter for can_cross_link