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Public Attributes | List of all members
Configuration Struct Reference

#include <OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h>

Inheritance diagram for Configuration:
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Collaboration diagram for Configuration:
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Public Attributes

String contact_ref
 
String instrument_ref
 
std::vector< CVTermList > validations
 

Additional Inherited Members

- Public Member Functions inherited from CVTermList
 CVTermList ()=default
 Defaults constructor.
 
 CVTermList (const CVTermList &)=default
 Copy constructor.
 
 CVTermList (CVTermList &&) noexcept
 Move constructor.
 
virtual ~CVTermList ()
 Destructor.
 
CVTermList & operator= (const CVTermList &rhs) &=default
 Assignment operator.
 
CVTermList & operator= (CVTermList &&) &=default
 Move assignment operator.
 
void setCVTerms (const std::vector< CVTerm > &terms)
 sets the CV terms
 
void replaceCVTerm (const CVTerm &cv_term)
 replaces the specified CV term
 
void replaceCVTerms (const std::vector< CVTerm > &cv_terms, const String &accession)
 replaces the specified CV terms using the given accession number
 
void replaceCVTerms (const std::map< String, std::vector< CVTerm > > &cv_term_map)
 replaces all cv terms with a map (can be obtained via getCVTerms)
 
void consumeCVTerms (const std::map< String, std::vector< CVTerm > > &cv_term_map)
 merges the given map into the member map, no duplicate checking
 
const std::map< String, std::vector< CVTerm > > & getCVTerms () const
 returns the accession string of the term
 
void addCVTerm (const CVTerm &term)
 adds a CV term
 
bool operator== (const CVTermList &cv_term_list) const
 equality operator
 
bool operator!= (const CVTermList &cv_term_list) const
 inequality operator
 
bool hasCVTerm (const String &accession) const
 checks whether the term has a value
 
bool empty () const
 return true if no terms are available
 
- Public Member Functions inherited from MetaInfoInterface
 MetaInfoInterface ()=default
 Constructor.
 
 MetaInfoInterface (const MetaInfoInterface &rhs)
 Copy constructor.
 
 MetaInfoInterface (MetaInfoInterface &&) noexcept
 Move constructor.
 
 ~MetaInfoInterface ()
 Destructor.
 
MetaInfoInterface & operator= (const MetaInfoInterface &rhs)
 Assignment operator.
 
MetaInfoInterface & operator= (MetaInfoInterface &&) noexcept
 Move assignment operator.
 
void swap (MetaInfoInterface &rhs)
 Swap contents.
 
bool operator== (const MetaInfoInterface &rhs) const
 Equality operator.
 
bool operator!= (const MetaInfoInterface &rhs) const
 Equality operator.
 
const DataValue & getMetaValue (const String &name) const
 Returns the value corresponding to a string, or DataValue::EMPTY if not found.
 
DataValue getMetaValue (const String &name, const DataValue &default_value) const
 Returns the value corresponding to a string, or a default value (e.g.: DataValue::EMPTY) if not found

 
const DataValue & getMetaValue (UInt index) const
 Returns the value corresponding to the index, or DataValue::EMPTY if not found.
 
DataValue getMetaValue (UInt index, const DataValue &default_value) const
 Returns the value corresponding to the index, or a default value (e.g.: DataValue::EMPTY) if not found

 
bool metaValueExists (const String &name) const
 Returns whether an entry with the given name exists.
 
bool metaValueExists (UInt index) const
 Returns whether an entry with the given index exists.
 
void setMetaValue (const String &name, const DataValue &value)
 Sets the DataValue corresponding to a name.
 
void setMetaValue (UInt index, const DataValue &value)
 Sets the DataValue corresponding to an index.
 
void removeMetaValue (const String &name)
 Removes the DataValue corresponding to name if it exists.
 
void removeMetaValue (UInt index)
 Removes the DataValue corresponding to index if it exists.
 
void addMetaValues (const MetaInfoInterface &from)
 
void getKeys (std::vector< String > &keys) const
 Fills the given vector with a list of all keys for which a value is set.
 
void getKeys (std::vector< UInt > &keys) const
 Fills the given vector with a list of all keys for which a value is set.
 
bool isMetaEmpty () const
 Returns if the MetaInfo is empty.
 
void clearMetaInfo ()
 Removes all meta values.
 
- Static Public Member Functions inherited from MetaInfoInterface
static MetaInfoRegistry & metaRegistry ()
 Returns a reference to the MetaInfoRegistry.
 
- Protected Member Functions inherited from MetaInfoInterface
void createIfNotExists_ ()
 Creates the MetaInfo object if it does not exist.
 
- Protected Attributes inherited from CVTermList
std::map< String, std::vector< CVTerm > > cv_terms_
 
- Protected Attributes inherited from MetaInfoInterface
MetaInfo * meta_ = nullptr
 Pointer to the MetaInfo object.
 

Member Data Documentation

◆ contact_ref

String contact_ref

◆ instrument_ref

String instrument_ref

◆ validations

std::vector<CVTermList> validations